RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 GAS1P54826 345 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 NAE1Q13564 534 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 RNF219Q5W0B1 726 aaPredicted RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 OR5M3Q8NGP4 307 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SLC38A5Q8WUX1 472 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 ARSGQ96EG1 525 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 MRPS24Q96EL2 167 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 OR2M2Q96R28 347 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SEPT5Q99719 369 aaPredicted RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 YIPF4Q9BSR8 244 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 MED20Q9H944 212 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 ZFYVE1Q9HBF4 777 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 TINAGQ9UJW2 476 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PRG3Q9Y2Y8 225 aaPredicted RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 HELZP42694 1942 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 IGLV3-10A0A075B6K4 115 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SELENOFO60613 162 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 HLA-DPB1P04440 258 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 FGF2P09038 288 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 NFYAP23511 347 aaPredicted RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 HMGA2P52926 109 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 EPHA4P54764 986 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PDSS1Q5T2R2 415 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 RNF165Q6ZSG1 346 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 CCDC36Q8IYA8 594 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 OR4K5Q8NGD3 323 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 FUZQ9BT04 418 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 C20orf85Q9H1P6 137 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 RCE1Q9Y256 329 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 CACNA1CQ13936 2221 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 OR2AG2A6NM03 316 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 E9PI62 339 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 H7C2Y5 167 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SIGLEC6O43699 453 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SOX30O94993 753 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 ADAP00813 363 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 RLN2P04090 185 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SRPRAP08240 638 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 CR2P20023 1033 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 TAS2R50P59544 299 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PURAQ00577 322 aaKnown RBP10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 HIST2H2AA3Q6FI13 130 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 SMARCD3Q6STE5 483 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 HORMAD2Q8N7B1 307 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 OR5D16Q8NGK9 328 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 OR1S1Q8NH92 325 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 ZDHHC1Q8WTX9 485 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 CD93Q9NPY3 652 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 CYSLTR2Q9NS75 346 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PLCL2Q9UPR0 1127 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 PCDHB1Q9Y5F3 818 aa10.6□□□□□ -0.71
SEC61A1-202ENST00000424880 A0A1B0GVI7 797 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 TRDV1A0A1B0GX56 115 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 MRPL3P09001 348 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF8P17098 575 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 AHRP35869 848 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 DGKGP49619 791 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 CTSCP53634 463 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 CDH11P55287 796 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 PFN3P60673 137 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 LGALS3BPQ08380 585 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF155Q12901 538 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 HSPB3Q12988 150 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 HLXQ14774 488 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 BEX5Q5H9J7 111 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 DNAJB7Q7Z6W7 309 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 EIF4E3Q8N5X7 224 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 OR4D10Q8NGI6 311 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 KCTD12Q96CX2 325 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 TMEM19Q96HH6 336 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 DDX31Q9H8H2 851 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 DNAJC11Q9NVH1 559 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 RPS6KB2Q9UBS0 482 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 ZNF282Q9UDV7 671 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 DTX4Q9Y2E6 619 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 NUBP2Q9Y5Y2 271 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 RAB19A4D1S5 217 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 MTMR11A4FU01 709 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 TMEM202A6NGA9 273 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 A8MVJ9 347 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 CHST10O43529 356 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 SDC3O75056 442 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 ALPPL2P10696 532 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 NPR2P20594 1047 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 ACHEP22303 614 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 RNF144AP50876 292 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 MC2RQ01718 297 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 TSC22D1Q15714 1073 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 C2orf68Q2NKX9 166 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 EOGTQ5NDL2 527 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 RNLSQ5VYX0 342 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 MSANTD1Q6ZTZ1 278 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 PLA2G15Q8NCC3 412 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 GINS4Q9BRT9 223 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 BCL2L14Q9BZR8 327 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 WSB2Q9NYS7 404 aaPredicted RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 KLK11Q9UBX7 282 aa10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 RUVBL1Q9Y265 456 aaKnown RBP10.59□□□□□ -0.71
SEC61A1-202ENST00000424880 TRABD2BA6NFA1 517 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms