RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TMEM208Q9BTX3 173 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RPP25Q9BUL9 199 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ZC4H2Q9NQZ6 224 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CHST7Q9NS84 486 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TAS2R10Q9NYW0 307 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 LHX3Q9UBR4 397 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SLCO3A1Q9UIG8 710 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RALYQ9UKM9 306 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CNOT11Q9UKZ1 510 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CD8B2A6NJW9 211 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 M0R233 179 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 BCAS1O75363 584 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF202O95125 648 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SBK2P0C263 348 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ALOX12P18054 663 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ACADLP28330 430 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CD70P32970 193 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SOX6P35712 828 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 GFRA1P56159 465 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PRSS12P56730 875 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PPP1CAP62136 330 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MORF4L2Q15014 288 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TAF1AQ15573 450 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 INO80DQ53TQ3 878 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CXorf66Q5JRM2 361 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NXNL2Q5VZ03 156 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MFSD7Q6UXD7 560 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 DNAJC14Q6Y2X3 702 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 BHLHA15Q7RTS1 189 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 REC114Q7Z4M0 266 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 COMTD1Q86VU5 262 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SERPINA9Q86WD7 417 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 C12orf56Q8IXR9 622 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KATNAL2Q8IYT4 538 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR4K14Q8NGD5 310 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM174Q8WUU8 243 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NEU4Q8WWR8 484 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NT5C3BQ969T7 300 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MAGOHBQ96A72 148 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FKBP10Q96AY3 582 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR5B2Q96R09 309 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 COPS4Q9BT78 406 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NAT9Q9BTE0 207 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KLF16Q9BXK1 252 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RSPO3Q9BXY4 272 aaPredicted RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PARD6BQ9BYG5 372 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 HEXA-AS1Q9H8Q6 139 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MEAF6Q9HAF1 191 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 XPNPEP1Q9NQW7 623 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ARMC1Q9NVT9 282 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 GPATCH2Q9NW75 528 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FAM118AQ9NWS6 357 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MED29Q9NX70 200 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KLHL14Q9P2G3 628 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 B3GAT1Q9P2W7 334 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CORO2BQ9UQ03 480 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 A0A1W2PQ72 361 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FAM220BPB1ANY3 271 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ADAM23O75077 832 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 STX11O75558 287 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 GYPCP04921 128 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 RYKP34925 604 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 OR1D4P47884 311 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KLK7P49862 253 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 SLC12A3P55017 1021 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PAFAH1B2P68402 229 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CD47Q08722 323 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 STX3Q13277 289 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 GUCA2BQ16661 112 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KLHL38Q2WGJ6 581 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 HYIQ5T013 277 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PMF1Q6P1K2 205 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TTC27Q6P3X3 843 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PLXDC2Q6UX71 529 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NRROSQ86YC3 692 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF440Q8IYI8 595 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 FAM185AQ8N0U4 392 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 GPR150Q8NGU9 434 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 VPS35Q96QK1 796 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PHOX2BQ99453 314 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 EFCAB11Q9BUY7 163 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TRIM31Q9BZY9 425 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 NPFFR1Q9GZQ6 430 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PARD6AQ9NPB6 346 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 TAS2R7Q9NYW3 318 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 CISD1Q9NZ45 108 aaKnown RBP3.31□□□□□ -1.88
TOP2A-201ENST00000423485 KCMF1Q9P0J7 381 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MBD2Q9UBB5 411 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 PPP2R2CQ9Y2T4 447 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 ASB1Q9Y576 335 aa3.31□□□□□ -1.88
TOP2A-201ENST00000423485 MN1Q10571 1320 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 EME2A4GXA9 379 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 IFNL4K9M1U5 179 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 M0R129 80 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 EI24O14681 340 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SEMA3DO95025 777 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ACTL6AO96019 429 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CCNE2O96020 404 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SAGP10523 405 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CD59P13987 128 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms