RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 TGM6O95932 706 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 IL18BPO95998 194 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 IGKV1D-16P01601 117 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 ALOX5P09917 674 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 NUDT17P0C025 328 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 BCKDHAP12694 445 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 PEPDP12955 493 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 CREB1P16220 341 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 CHMP24386 653 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 MAPK1P28482 360 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 PEX19P40855 299 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 ASMTP46597 345 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 ART1P52961 327 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 EEFSECP57772 596 aaKnown RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 C17orf67Q0P5P2 114 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 BCL2A1Q16548 175 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 UGT3A2Q3SY77 523 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 FLYWCH1Q4VC44 716 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 PPP4R4Q6NUP7 873 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 FIGNL1Q6PIW4 674 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 R3HCC1LQ7Z5L2 792 aaKnown RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 NUDCD3Q8IVD9 361 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 MEIOBQ8N635 442 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 OR2M3Q8NG83 312 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 FAM222BQ8WU58 562 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 SMPDL3BQ92485 455 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 JADE3Q92613 823 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 ZBED6CLQ96FA7 236 aaPredicted RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 OTUB1Q96FW1 271 aaPredicted RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 C16orf58Q96GQ5 468 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 PPP3R2Q96LZ3 170 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 C1orf50Q9BV19 199 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 RBM24Q9BX46 236 aaKnown RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 RTN4RQ9BZR6 473 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 CLEC4MQ9H2X3 399 aaPredicted RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 LIME1Q9H400 295 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 FAM120CQ9NX05 1096 aaKnown RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 MKS1Q9NXB0 559 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 ZDHHC2Q9UIJ5 367 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 FOXD3Q9UJU5 478 aaPredicted RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 TMED5Q9Y3A6 229 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 SNX8Q9Y5X2 465 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 APCP25054 2843 aa8.41□□□□□ -1.06
NUP50-206ENST00000422489 NCOA6Q14686 2063 aaPredicted RBP8.41□□□□□ -1.06
NUP50-206ENST00000422489 OR2M5A3KFT3 312 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 A6NNC1 897 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 B4DXG7 233 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 SHISA8B8ZZ34 492 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 NPIPB8E9PQR5 432 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 H3BML4 177 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CASKO14936 926 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CTIFO43310 598 aaKnown RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 TBX19O60806 448 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 SKAP2O75563 359 aaPredicted RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.06
NUP50-206ENST00000422489 NKX2-2O95096 273 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 PSMG1O95456 288 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 OPN1LWP04000 364 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 ACP2P11117 423 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 HPGDP15428 266 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 ZNF708P17019 499 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 DDX5P17844 614 aaKnown RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 DNAJA1P31689 397 aaKnown RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 HPCAL1P37235 193 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 IST1P53990 364 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 DIO3P55073 304 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CLDN18P56856 261 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 B3GALT5-AS1P59052 145 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 SGCBQ16585 318 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 GRAMD1BQ3KR37 738 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 FBXL19-AS1Q494R0 122 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 SPDYE7PQ495Y7 208 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 ATP6AP1LQ52LC2 224 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CPTPQ5TA50 214 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 IL23RQ5VWK5 629 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 EMBQ6PCB8 327 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 LRIG3Q6UXM1 1119 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 APOOLQ6UXV4 268 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CNEP1R1Q8N9A8 125 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 FADS6Q8N9I5 356 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CDRT4Q8N9R6 151 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 GATSQ8NAP1 163 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 FNDC5Q8NAU1 212 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 SLC16A11Q8NCK7 471 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 OR7A2PQ8NGA2 310 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 OR4C3Q8NH37 302 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 AENQ8WTP8 325 aaKnown RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 NUDT8Q8WV74 236 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 TUBGCP3Q96CW5 907 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 MTERF3Q96E29 417 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 FCRL1Q96LA6 429 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 SFXN3Q9BWM7 321 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 CENPHQ9H3R5 247 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 RASSF1Q9NS23 344 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 ACSS1Q9NUB1 689 aaPredicted RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 ZCCHC3Q9NUD5 404 aaKnown RBP8.4□□□□□ -1.06
NUP50-206ENST00000422489 LGALS13Q9UHV8 139 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 ABCG2Q9UNQ0 655 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms