RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 TCEA1P23193 301 aaKnown RBP16.9■□□□□ 0.3
ITGA6-204ENST00000412899 LHX2P50458 406 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 C2orf80Q0P641 193 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 SHEQ5VZ18 495 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 OR5M10Q6IEU7 315 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 NOXRED1Q6NXP6 359 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 CHMP1BQ7LBR1 199 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 P4HA3Q7Z4N8 544 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 CCDC116Q8IYX3 515 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 EXOSC8Q96B26 276 aaKnown RBP16.9■□□□□ 0.3
ITGA6-204ENST00000412899 METTL2AQ96IZ6 378 aaKnown RBP16.9■□□□□ 0.3
ITGA6-204ENST00000412899 ZNF681Q96N22 645 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 ADOQ96SZ5 270 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 TUBB1Q9H4B7 451 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 LRTM1Q9HBL6 345 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 C1orf109Q9NX04 203 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 FBXL2Q9UKC9 423 aa16.9■□□□□ 0.3
ITGA6-204ENST00000412899 BIRC5O15392 142 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 ARHGEF9O43307 516 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 SMNDC1O75940 238 aaKnown RBP eCLIP16.89■□□□□ 0.29
ITGA6-204ENST00000412899 NEFHP12036 1026 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 ZNF708P17019 499 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 IL12BP29460 328 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 ARRB2P32121 409 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 MPP2Q14168 576 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 CHI3L2Q15782 390 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 UGT3A2Q3SY77 523 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 CLEC9AQ6UXN8 241 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 RNF165Q6ZSG1 346 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 Q6ZSR9 355 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 SAMD14Q8IZD0 417 aaPredicted RBP16.89■□□□□ 0.29
ITGA6-204ENST00000412899 OR6Y1Q8NGX8 325 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 TWIST2Q8WVJ9 160 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 SLC35A4Q96G79 324 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 ANKRA2Q9H9E1 313 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 GIMAP4Q9NUV9 329 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 NAV3Q8IVL0 2385 aa16.89■□□□□ 0.29
ITGA6-204ENST00000412899 MED12Q93074 2177 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 A0A1W2PNV4 684 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 TNFSF13O75888 250 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 HSPA4LO95757 839 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 TGM6O95932 706 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 DDCP20711 480 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 PRPH2P23942 346 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 DPP4P27487 766 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 CLDN18P56856 261 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 CORO7P57737 925 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 EFR3AQ14156 821 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 KIAA0040Q15053 153 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 ZNF628Q5EBL2 1059 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 LARP4Q71RC2 724 aaKnown RBP eCLIP16.88■□□□□ 0.29
ITGA6-204ENST00000412899 KRTAP1-3Q8IUG1 177 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 P3H2Q8IVL5 708 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 OR2T11Q8NH01 316 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 KAT2AQ92830 837 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 BTBD9Q96Q07 612 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 PAIP2Q9BPZ3 127 aaKnown RBP16.88■□□□□ 0.29
ITGA6-204ENST00000412899 ZNF395Q9H8N7 513 aaPredicted RBP16.88■□□□□ 0.29
ITGA6-204ENST00000412899 MYNNQ9NPC7 610 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 MIEF1Q9NQG6 463 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 SLC35C2Q9NQQ7 365 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 ZDHHC2Q9UIJ5 367 aa16.88■□□□□ 0.29
ITGA6-204ENST00000412899 WBP11Q9Y2W2 641 aaKnown RBP16.88■□□□□ 0.29
ITGA6-204ENST00000412899 MRPS18CQ9Y3D5 142 aaKnown RBP16.88■□□□□ 0.29
ITGA6-204ENST00000412899 NPIPB8E9PQR5 432 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 MSTNO14793 375 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 PIP5K1BO14986 540 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 HCRTR2O43614 444 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 TSPAN2O60636 221 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 NME6O75414 186 aaPredicted RBP16.87■□□□□ 0.29
ITGA6-204ENST00000412899 SERPINE1P05121 402 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 DHRS4L1P0CG22 281 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 CT45A8P0DMV1 189 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 CT45A9P0DMV2 189 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 GRK2P25098 689 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 GALNTL6Q49A17 601 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 CT45A2Q5DJT8 189 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 HHATQ5VTY9 493 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 OR2A2Q6IF42 318 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 FAM71E1Q6IPT2 247 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 CXorf67Q86X51 503 aaPredicted RBP16.87■□□□□ 0.29
ITGA6-204ENST00000412899 UBQLNLQ8IYU4 475 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 CNEP1R1Q8N9A8 125 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 ANKRD42Q8N9B4 389 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 OR4K17Q8NGC6 315 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 OR9A2Q8NGT5 310 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.87■□□□□ 0.29
ITGA6-204ENST00000412899 ERP27Q96DN0 273 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 C6orf203Q9P0P8 240 aaPredicted RBP16.87■□□□□ 0.29
ITGA6-204ENST00000412899 TESMINQ9Y4I5 508 aa16.87■□□□□ 0.29
ITGA6-204ENST00000412899 ZNF469Q96JG9 3925 aaPredicted RBP16.87■□□□□ 0.29
ITGA6-204ENST00000412899 HRNRQ86YZ3 2850 aaPredicted RBP16.87■□□□□ 0.29
ITGA6-204ENST00000412899 LSM1O15116 133 aaKnown RBP16.86■□□□□ 0.29
ITGA6-204ENST00000412899 ZIC3O60481 467 aa16.86■□□□□ 0.29
ITGA6-204ENST00000412899 LYPLA1O75608 230 aaPredicted RBP16.86■□□□□ 0.29
ITGA6-204ENST00000412899 CRHP06850 196 aa16.86■□□□□ 0.29
ITGA6-204ENST00000412899 MPIP34949 423 aa16.86■□□□□ 0.29
ITGA6-204ENST00000412899 PNLIPRP2P54317 469 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms