RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ROS1P08922 2347 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ULK1O75385 1050 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PLAUP00749 431 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SBK3P0C264 359 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FCGR2AP12318 317 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 NID1P14543 1247 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PAX1P15863 534 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PPP3CBP16298 524 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ATP5J2P56134 94 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ACSM2AQ08AH3 577 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RASA2Q15283 850 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 DECR1Q16698 335 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GLYR1Q49A26 553 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CYP27C1Q4G0S4 372 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ACSM2BQ68CK6 577 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TMEM151AQ8N4L1 468 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 METTL25Q8N6Q8 603 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GFM2Q969S9 779 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 C1GALT1C1Q96EU7 318 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 APIPQ96GX9 242 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CXorf56Q9H5V9 222 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZDHHC18Q9NUE0 388 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ZNF701Q9NV72 531 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 DMGDHQ9UI17 866 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 EMC9Q9Y3B6 208 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 AP4B1Q9Y6B7 739 aa12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CHD3Q12873 2000 aaKnown RBP12.79□□□□□ -0.36
HLA-DQB2-229ENST00000411527 USF3Q68DE3 2245 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 MYO1GB0I1T2 1018 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SHISA8B8ZZ34 492 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GMFGO60234 142 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 COQ9O75208 318 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CRLF1O75462 422 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SUPT7LO94864 414 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PLGP00747 810 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 JUNP05412 331 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 HMOX2P30519 316 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 RFX3P48380 749 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SERPINB9P50453 376 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 NR1H2P55055 460 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 OCRLQ01968 901 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 BTKQ06187 659 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 TNK1Q13470 666 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 SPIN4Q56A73 249 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 LGSNQ5TDP6 509 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 STAC2Q6ZMT1 411 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 OR6K3Q8NGY3 331 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 METTL6Q8TCB7 284 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PLPPR2Q96GM1 343 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 PAFAH2Q99487 392 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 EBPLQ9BY08 206 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 ACPTQ9BZG2 426 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 GRPEL1Q9HAV7 217 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 FAM120CQ9NX05 1096 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 CLEC4AQ9UMR7 237 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
HLA-DQB2-229ENST00000411527 A0A087WV62 115 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 EIF1AYO14602 144 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HS3ST1O14792 307 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IL33O95760 270 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ANXA4P09525 319 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TIA1P31483 386 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 EIF1AXP47813 144 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SLC6A8P48029 635 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HTR6P50406 440 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 NCBP2P52298 156 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CTBP2P56545 445 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C17orf67Q0P5P2 114 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C2orf80Q0P641 193 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CAPRIN1Q14444 709 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PRSS53Q2L4Q9 553 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 UNC50Q53HI1 259 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMEM107Q6UX40 140 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GPRIN3Q6ZVF9 776 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GGNQ86UU5 652 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 WFDC8Q8IUA0 241 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF611Q8N823 705 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CDC26Q8NHZ8 85 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GMPPAQ96IJ6 420 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TBL1XR1Q9BZK7 514 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 Q9N2J8 555 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 STOML1Q9UBI4 398 aa12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MRTO4Q9UKD2 239 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 C19orf53Q9UNZ5 99 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB2-229ENST00000411527 POC1B-GALNT4F8VUJ3 575 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 UPK1AO00322 258 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMCC2O75069 709 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ANGPTL1O95841 491 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TAC1P20366 129 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 DDCP20711 480 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IL11P20809 199 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CASQ1P31415 396 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PSMD4P55036 377 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 KRTAP1-1Q07627 177 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNHIT3Q15649 155 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF678Q5SXM1 525 aa12.76□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ALKBH2Q6NS38 261 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms