RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 SDHAF3Q9NRP4 125 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TMLHEQ9NVH6 421 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 COA4Q9NYJ1 87 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CD274Q9NZQ7 290 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 KLHL8Q9P2G9 620 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 LPAR3Q9UBY5 353 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 EPHA6Q9UF33 1036 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 AGO1Q9UL18 857 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 SAMD4AQ9UPU9 718 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 HES2Q9Y543 173 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 AP1M2Q9Y6Q5 423 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 COL12A1Q99715 3063 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 LAMA5O15230 3695 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GREB1Q4ZG55 1949 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TRAV6A0A075B6T7 132 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 A0A0B4J293 547 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 A0A0G2JPF8 293 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CIB4A0PJX0 185 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 A8MXK9 166 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FAM220BPB1ANY3 271 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 HNRNPCL3B7ZW38 293 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZNF670-ZNF695F2Z2N8 137 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 M0QYV0 167 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 M0R233 179 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PSMD9O00233 223 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DFFAO00273 331 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CXCR6O00574 342 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OGTO15294 1046 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 YY2O15391 372 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FABP7O15540 132 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 C9P02748 559 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CNPP09543 421 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 HNRNPCL4P0DMR1 293 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 EGR2P11161 476 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 SLC2A2P11168 524 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 PSMA1P25786 263 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 S100PP25815 95 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TGFBR1P36897 503 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CASP2P42575 452 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 RPL35P42766 123 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 MAGEA2P43356 314 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ARHGDIBP52566 201 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PNLIPRP1P54315 467 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CSTF1Q05048 431 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 STX4Q12846 297 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FHL3Q13643 280 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TSNQ15631 228 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZNF284Q2VY69 593 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 KLHL22Q53GT1 634 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PABPC1L2AQ5JQF8 200 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ABHD17BQ5VST6 288 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 NCBP2-AS2Q69YL0 99 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SLC27A4Q6P1M0 643 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 KDELC1Q6UW63 502 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PAMR1Q6UXH9 720 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FAM92BQ6ZTR7 304 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TMEM179Q6ZVK1 233 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 IKBIPQ70UQ0 350 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TRILQ7L0X0 811 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SLC44A2Q8IWA5 706 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 C11orf44Q8N8P7 122 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PPHLN1Q8NEY8 458 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR1M1Q8NGA1 313 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR4F6Q8NGB9 312 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR52K1Q8NGK4 314 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR52N1Q8NH53 320 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GANCQ8TET4 914 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ASB12Q8WXK4 309 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TFAP2BQ92481 460 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 RSPRY1Q96DX4 576 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OTUB1Q96FW1 271 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 P2RY11Q96G91 374 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DIRAS2Q96HU8 199 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CSPG4P5Q96PW8 444 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SEC22CQ9BRL7 303 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CDCA4Q9BXL8 241 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GABARAPL3Q9BY60 117 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GPR63Q9BZJ6 419 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR51E2Q9H255 320 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 TRIM36Q9NQ86 728 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GKN1Q9NS71 199 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DCAF13Q9NV06 445 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 KCTD5Q9NXV2 234 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 STEAP1Q9UHE8 339 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 POLG2Q9UHN1 485 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PURGQ9UJV8 347 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 TINAGQ9UJW2 476 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 IKZF3Q9UKT9 509 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SPATA2Q9UM82 520 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SSR3Q9UNL2 185 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DTX4Q9Y2E6 619 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PARP14Q460N5 1801 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 PIPSLA2A3N6 862 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 E9PAM4 449 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 H3BNC9 293 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 AIPO00170 330 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 KCNK1O00180 336 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 QSOX1O00391 747 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 ADAM12O43184 909 aa5.11□□□□□ -1.59
CLK1-202ENST00000409403 DHHO43323 396 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms