RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 IL33O95760 270 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 OPN1SWP03999 348 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 FBXO45P0C2W1 286 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 CCL3P10147 92 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 BMP2P12643 396 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 ATP6V1C1P21283 382 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 HPCAP84074 193 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 VMACQ2NL98 169 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 FLYWCH1Q4VC44 716 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 TYW3Q6IPR3 259 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 OPN5Q6U736 354 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 SERPINA11Q86U17 422 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 HPS6Q86YV9 775 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 ARMC10Q8N2F6 343 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 CHDHQ8NE62 594 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 FAM110BQ8TC76 370 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 UTP4Q969X6 686 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 COL21A1Q96P44 957 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 TREX2Q9BQ50 279 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 UTP23Q9BRU9 249 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 CADM1Q9BY67 442 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 RTN4RQ9BZR6 473 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 PCDHAC1Q9H158 963 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 SLC38A1Q9H2H9 487 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 MMADHCQ9H3L0 296 aaPredicted RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 GALNT9Q9HCQ5 603 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 A4GALTQ9NPC4 353 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 NDE1Q9NXR1 346 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 LRFN1Q9P244 771 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 ABI3Q9P2A4 366 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 TP53TG5Q9Y2B4 290 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 WDR45Q9Y484 360 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 PCDHGB3Q9Y5G1 929 aa12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 DSPP15924 2871 aaKnown RBP12.96□□□□□ -0.33
CHRNA1-204ENST00000409323 A0A0G2JMM0 328 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 A0A1W2PPB8 328 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 A0A1W2PRS3 328 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 CLDN24A6NM45 220 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 KIR3DP1A8MWS1 328 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 FAM220BPB1ANY3 271 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 MKRN2OSH3BPM6 223 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 GSC2O15499 205 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 SCO2O43819 266 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 ABCB7O75027 752 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 STX11O75558 287 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 CYB561P49447 251 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 ERFP50548 548 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 EEFSECP57772 596 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 GPR85P60893 370 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 KCNJ2P63252 427 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 OR1C1Q15619 314 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 MAPK14Q16539 360 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 NET1Q7Z628 596 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 MICU2Q8IYU8 434 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 C11orf65Q8NCR3 313 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 OR10Q1Q8NGQ4 319 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 FIG4Q92562 907 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 HGDQ93099 445 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 REXO5Q96IC2 774 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 SMAD5Q99717 465 aaKnown RBP12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 ZNF350Q9GZX5 532 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 LUZP4Q9P127 313 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 CD300AQ9UGN4 299 aa12.95□□□□□ -0.34
CHRNA1-204ENST00000409323 PKD1L2Q7Z442 2459 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 ELOVL7A1L3X0 281 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 TMEM247A6NEH6 219 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 TTC36A6NLP5 189 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 GSTA4O15217 222 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 GCM2O75603 506 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 NEURL1O76050 574 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 PGM3O95394 542 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 AGR2O95994 175 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 PGM1P36871 562 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 DCTP40126 519 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 CASRP41180 1078 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 HLCSP50747 726 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 CRISP3P54108 245 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 INPP5JQ15735 1006 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 NTRK2Q16620 822 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 SAMD4BQ5PRF9 694 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 PDZK1Q5T2W1 519 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 APOOLQ6UXV4 268 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 VRK2Q86Y07 508 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 SLC15A4Q8N697 577 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 GRHL3Q8TE85 626 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 TRNT1Q96Q11 434 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 RSPO3Q9BXY4 272 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 TMEM38AQ9H6F2 299 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 MRTO4Q9UKD2 239 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 HRH3Q9Y5N1 445 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 CHCHD2Q9Y6H1 151 aaPredicted RBP12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 ATMQ13315 3056 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 PCNX3Q9H6A9 2034 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 OR5H15A6NDH6 313 aa12.94□□□□□ -0.34
CHRNA1-204ENST00000409323 OR6C70A6NIJ9 312 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms