RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SRP54P61011 504 aaKnown RBP15.71■□□□□ 0.11
NUP50-203ENST00000407019 COPZ1P61923 177 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 PSPHP78330 225 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 MXD1Q05195 221 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 TPBGQ13641 420 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 PLK5Q496M5 336 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 TMPRSS11AQ6ZMR5 421 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 ZNF620Q6ZNG0 422 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 SHFQ7M4L6 423 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 TRIM48Q8IWZ4 208 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 SIMC1Q8NDZ2 872 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 GATAD2BQ8WXI9 593 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 TM9SF4Q92544 642 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 UFD1Q92890 307 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 TMEM203Q969S6 136 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 SLC25A46Q96AG3 418 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 TXNDC15Q96J42 360 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 MRGPRX1Q96LB2 322 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 KRCC1Q9NPI7 259 aaPredicted RBP15.71■□□□□ 0.11
NUP50-203ENST00000407019 INIPQ9NRY2 104 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 MED17Q9NVC6 651 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 IL20Q9NYY1 176 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 PILRAQ9UKJ1 303 aa15.71■□□□□ 0.11
NUP50-203ENST00000407019 ATP6V1G1O75348 118 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 CH25HO95992 272 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 THBS1P07996 1170 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 RPS25P62851 125 aaKnown RBP15.71■□□□□ 0.1
NUP50-203ENST00000407019 EEF1A1P68104 462 aaKnown RBP15.71■□□□□ 0.1
NUP50-203ENST00000407019 DUSP8Q13202 625 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 GPR18Q14330 331 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 ALG11Q2TAA5 492 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 PGGHGQ32M88 737 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 ZNF628Q5EBL2 1059 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 C22orf42Q6IC83 251 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 GDPD3Q7L5L3 318 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 LAX1Q8IWV1 398 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 OR8H2Q8N162 312 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 POGLUT1Q8NBL1 392 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 GALNT6Q8NCL4 622 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 RIPOR3Q96MK2 946 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 SDF2Q99470 211 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 ZFYVE21Q9BQ24 234 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 S1PR5Q9H228 398 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 TPK1Q9H3S4 243 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 LYRM4Q9HD34 91 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 TMEM74BQ9NUR3 256 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 C14orf119Q9NWQ9 140 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 NLGN3Q9NZ94 848 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 SLC7A7Q9UM01 511 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 CMAHPQ9Y471 501 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 CDH10Q9Y6N8 788 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 V9GYH0 126 aa15.71■□□□□ 0.1
NUP50-203ENST00000407019 LOC105369274A0A096LPK9 316 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 LOC102723532A0A0G2JNH3 316 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 ZNF860A6NHJ4 632 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 LIMS3P0CW19 117 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 LIMS4P0CW20 117 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 ID2Q02363 134 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 TRMT12Q53H54 448 aaKnown RBP15.7■□□□□ 0.1
NUP50-203ENST00000407019 CCNJQ5T5M9 372 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 AADACL4Q5VUY2 407 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 CCBE1Q6UXH8 406 aaPredicted RBP15.7■□□□□ 0.1
NUP50-203ENST00000407019 OR4N4Q8N0Y3 316 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 CLDN22Q8N7P3 220 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 RERGQ96A58 199 aaPredicted RBP15.7■□□□□ 0.1
NUP50-203ENST00000407019 KCTD7Q96MP8 289 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 PIGUQ9H490 435 aa15.7■□□□□ 0.1
NUP50-203ENST00000407019 C19orf53Q9UNZ5 99 aaPredicted RBP15.7■□□□□ 0.1
NUP50-203ENST00000407019 SLC35F4A4IF30 521 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 SLC30A4O14863 429 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 SOX18P35713 384 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 SLC1A3P43003 542 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 TGM4P49221 684 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 TPTEP56180 551 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 HNRNPA0Q13151 305 aaKnown RBP15.69■□□□□ 0.1
NUP50-203ENST00000407019 GPR68Q15743 365 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 FHL5Q5TD97 284 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 RANBP3LQ86VV4 465 aaPredicted RBP15.69■□□□□ 0.1
NUP50-203ENST00000407019 GALNT12Q8IXK2 581 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 ZNF619Q8N2I2 560 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 ITFG2Q969R8 447 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 C1GALT1C1Q96EU7 318 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 ARHGAP9Q9BRR9 750 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 MED18Q9BUE0 208 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 ZNF350Q9GZX5 532 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 RERGLQ9H628 205 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 ADAP2Q9NPF8 381 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 TOR4AQ9NXH8 423 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 CLEC1BQ9P126 229 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 YARS2Q9Y2Z4 477 aaKnown RBP15.69■□□□□ 0.1
NUP50-203ENST00000407019 MRPS2Q9Y399 296 aaKnown RBP15.69■□□□□ 0.1
NUP50-203ENST00000407019 SF3B6Q9Y3B4 125 aaKnown RBP15.69■□□□□ 0.1
NUP50-203ENST00000407019 SPACA6W5XKT8 324 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 CENPVL1A0A0U1RR11 272 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 LRRC72A6NJI9 287 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 NDUFV2P19404 249 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 AKT2P31751 481 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 TMED10P49755 219 aaKnown RBP15.69■□□□□ 0.1
NUP50-203ENST00000407019 ZNF136P52737 540 aa15.69■□□□□ 0.1
NUP50-203ENST00000407019 DCST2Q5T1A1 773 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms