RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 TBL1XR1Q9BZK7 514 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 TRIM8Q9BZR9 551 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 DUSP22Q9NRW4 184 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 DKKL1Q9UK85 242 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
SEC13-204ENST00000397099 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
SEC13-204ENST00000397099 FBN2P35556 2912 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 A0A0G2JNJ9 132 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 FAM90A27PA6NNH2 459 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 FADS1O60427 444 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 ALOX5P09917 674 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 IGFBP2P18065 325 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 DPP4P27487 766 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 MSX1P28360 303 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 CEACAM8P31997 349 aaPredicted RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 ARRB2P32121 409 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 GAS1P54826 345 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 DIO3P55073 304 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 CLDN8P56748 225 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 EEFSECP57772 596 aaKnown RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEC13-204ENST00000397099 EIPR1Q53HC9 387 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 ZNF385BQ569K4 471 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 WIPI1Q5MNZ9 446 aaPredicted RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 ANKRD26P1Q6NSI1 321 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 MFSD12Q6NUT3 480 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 MEX3BQ6ZN04 569 aaKnown RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 YRDCQ86U90 279 aaKnown RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 CCDC71Q8IV32 467 aaPredicted RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 RPRMLQ8N4K4 120 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 VPS37AQ8NEZ2 397 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 OR4N2Q8NGD1 307 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 OR56A1Q8NGH5 318 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 CLHC1Q8NHS4 586 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 SFXN5Q8TD22 340 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 SLC9A6Q92581 669 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 C3orf30Q96M34 536 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 UCN2Q96RP3 112 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 ACBD3Q9H3P7 528 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 TNFRSF10DQ9UBN6 386 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 Q9UFV3 132 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 FOXD3Q9UJU5 478 aaPredicted RBP12.68□□□□□ -0.38
SEC13-204ENST00000397099 SLC6A5Q9Y345 797 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 CSMD1Q96PZ7 3565 aa12.68□□□□□ -0.38
SEC13-204ENST00000397099 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 IGLV3-32A0A0A0MS00 114 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 WDR91A4D1P6 747 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 SLCO1B7G3V0H7 640 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 TOXO94900 526 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 IL18BPO95998 194 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 CAPN3P20807 821 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 OPRM1P35372 400 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 PRKAG1P54619 331 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 GFRA1P56159 465 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 OCRLQ01968 901 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 TFF3Q07654 80 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 PTGR1Q14914 329 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 DPY19L1Q2PZI1 675 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 ATG16L1Q676U5 607 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 DESI1Q6ICB0 168 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 SZRD1Q7Z422 152 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 RIMKLAQ8IXN7 391 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 ZNF295-AS1Q8N0V1 137 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 FADS6Q8N9I5 356 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 FAM110BQ8TC76 370 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 GIMAP5Q96F15 307 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 WDYHV1Q96HA8 205 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 SFXN2Q96NB2 322 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 TM9SF2Q99805 663 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 C1orf50Q9BV19 199 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 EQTNQ9NQ60 294 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 UBQLN4Q9NRR5 601 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 ZCCHC3Q9NUD5 404 aaKnown RBP12.67□□□□□ -0.38
SEC13-204ENST00000397099 NKIRAS1Q9NYS0 192 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 PCDHGB4Q9UN71 923 aa12.67□□□□□ -0.38
SEC13-204ENST00000397099 FAF1Q9UNN5 650 aaPredicted RBP12.67□□□□□ -0.38
SEC13-204ENST00000397099 A0A087WZY1 265 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 NKX2-6A6NCS4 301 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 DUXAA6NLW8 204 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 ALG1L2C9J202 215 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 ITM2AO43736 263 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 UTS2O95399 124 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 LAMP1P11279 417 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 PEPDP12955 493 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 HPGDP15428 266 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 TBXA2RP21731 343 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 LRRC74AQ0VAA2 488 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 TP53BP2Q13625 1128 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 PDCD2Q16342 344 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 SPDYE7PQ495Y7 208 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 DMRTC2Q8IXT2 367 aaPredicted RBP12.66□□□□□ -0.38
SEC13-204ENST00000397099 COX18Q8N8Q8 333 aa12.66□□□□□ -0.38
SEC13-204ENST00000397099 ZNF527Q8NB42 609 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms