RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 A0A1W2PNV4 684 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 SLC28A1O00337 649 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 PDPK1O15530 556 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 AKAP10O43572 662 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 CHRNGP07510 517 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 IFI6P09912 130 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 GABRA3P34903 492 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 RPL38P63173 70 aaKnown RBP16.28■□□□□ 0.2
CXCL12-204ENST00000395793 BCL2A1Q16548 175 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 GRAMD1BQ3KR37 738 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 RFTN2Q52LD8 501 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-204ENST00000395793 RAET1LQ5VY80 246 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 KANK2Q63ZY3 851 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 RNF165Q6ZSG1 346 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 EXOC3L1Q86VI1 746 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 DUSP19Q8WTR2 217 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 FIG4Q92562 907 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 GIMAP5Q96F15 307 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 ZNF764Q96H86 408 aaPredicted RBP16.28■□□□□ 0.2
CXCL12-204ENST00000395793 TSSK3Q96PN8 268 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 CCT7Q99832 543 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 MKS1Q9NXB0 559 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 BAIAP2L1Q9UHR4 511 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 ZNF337Q9Y3M9 751 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 DNAJC15Q9Y5T4 150 aa16.28■□□□□ 0.2
CXCL12-204ENST00000395793 OR2M5A3KFT3 312 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 A8MXE2 369 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 SHISA8B8ZZ34 492 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 LSM1O15116 133 aaKnown RBP16.27■□□□□ 0.2
CXCL12-204ENST00000395793 RGS14O43566 566 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 UTS2O95399 124 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 LINC00032P0C843 101 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 FRKP42685 505 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-204ENST00000395793 CLDN20P56880 219 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 PDE7AQ13946 482 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 ZNHIT3Q15649 155 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-204ENST00000395793 VWA1Q6PCB0 445 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 PAMR1Q6UXH9 720 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 GALNT10Q86SR1 603 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 GOT1L1Q8NHS2 421 aaPredicted RBP16.27■□□□□ 0.2
CXCL12-204ENST00000395793 FBXO30Q8TB52 745 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 DTNBP1Q96EV8 351 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 APOPT1Q96IL0 206 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 MECRQ9BV79 373 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 TMUB1Q9BVT8 246 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 REEP4Q9H6H4 257 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 ANKZF1Q9H8Y5 726 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 GIMAP2Q9UG22 337 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 PACSIN3Q9UKS6 424 aa16.27■□□□□ 0.2
CXCL12-204ENST00000395793 NF1P21359 2839 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 GMFGO60234 142 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 TBX19O60806 448 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 TRIM13O60858 407 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 NKX2-2O95096 273 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 HRGP04196 525 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 ACP2P11117 423 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 PEPDP12955 493 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 EFNA1P20827 205 aaPredicted RBP16.26■□□□□ 0.19
CXCL12-204ENST00000395793 ALDH3A1P30838 453 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 ARRB2P32121 409 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 CPA2P48052 419 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 POU4F3Q15319 338 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 UGT3A2Q3SY77 523 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 ZAR1Q86SH2 424 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 TRABD2AQ86V40 505 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 BANPQ8N9N5 519 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 PPCDCQ96CD2 204 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 STARD4Q96DR4 205 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 C1GALT1C1Q96EU7 318 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 KLHDC3Q9BQ90 382 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 TRMOQ9BU70 441 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 ACBD3Q9H3P7 528 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 PIGMQ9H3S5 423 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 PLEKHF2Q9H8W4 249 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 SLC17A7Q9P2U7 560 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 MID2Q9UJV3 735 aa16.26■□□□□ 0.19
CXCL12-204ENST00000395793 MAP1AP78559 2803 aaPredicted RBP16.25■□□□□ 0.19
CXCL12-204ENST00000395793 IGLV3-32A0A0A0MS00 114 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 TLDC2A0PJX2 215 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 SH3D21A4FU49 640 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 SLC22A20A6NK97 555 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 H3BML4 177 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 SEC14L5O43304 696 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 ATE1O95260 518 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 ANGPTL1O95841 491 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 PRPS2P11908 318 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 NEFHP12036 1026 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 DNASE1P24855 282 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 PRR5P85299 388 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 GANABQ14697 944 aaKnown RBP16.25■□□□□ 0.19
CXCL12-204ENST00000395793 TMEM44Q2T9K0 475 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 GALNTL6Q49A17 601 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 EXOSC6Q5RKV6 272 aaKnown RBP16.25■□□□□ 0.19
CXCL12-204ENST00000395793 TGIF2LYQ8IUE0 185 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 MEIOBQ8N635 442 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 NUP43Q8NFH3 380 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 GPR151Q8TDV0 419 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 TWIST2Q8WVJ9 160 aa16.25■□□□□ 0.19
CXCL12-204ENST00000395793 OTUB1Q96FW1 271 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms