RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 ATAD3AQ9NVI7 634 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 PLEKHA6Q9Y2H5 1048 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 SPACA6W5XKT8 324 aa17.06■□□□□ 0.32
SNCB-202ENST00000393693 FAM221AA4D161 298 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 WASHC1A8K0Z3 465 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 SCAMP2O15127 329 aaKnown RBP17.05■□□□□ 0.32
SNCB-202ENST00000393693 AKAP10O43572 662 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 SCELO95171 688 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 KCNH1O95259 989 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 GABRA1P14867 456 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 BSGP35613 385 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 SSR2P43308 183 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 DGKQP52824 942 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 MAPK12P53778 367 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 ELF3P78545 371 aaPredicted RBP17.05■□□□□ 0.32
SNCB-202ENST00000393693 C2orf80Q0P641 193 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 SLAMF1Q13291 335 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 SPANXN4Q5MJ08 99 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 ANXA8L1Q5VT79 327 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 C18orf63Q68DL7 685 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 RETREG3Q86VR2 466 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 LRRC25Q8N386 305 aaPredicted RBP17.05■□□□□ 0.32
SNCB-202ENST00000393693 FBXW8Q8N3Y1 598 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 NATD1Q8N6N6 113 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 NAXEQ8NCW5 288 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 FAM13CQ8NE31 585 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 OR10G3Q8NGC4 313 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 LRRC58Q96CX6 371 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 RBM18Q96H35 190 aaKnown RBP17.05■□□□□ 0.32
SNCB-202ENST00000393693 ITCHQ96J02 903 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 EGLN2Q96KS0 407 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 CDRT15Q96T59 188 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 GSX1Q9H4S2 264 aaPredicted RBP17.05■□□□□ 0.32
SNCB-202ENST00000393693 REEP4Q9H6H4 257 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 SPAG4Q9NPE6 437 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 RASSF1Q9NS23 344 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 ADA2Q9NZK5 511 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 BCAP29Q9UHQ4 241 aa17.05■□□□□ 0.32
SNCB-202ENST00000393693 MAP1AP78559 2803 aaPredicted RBP17.05■□□□□ 0.32
SNCB-202ENST00000393693 SYT5O00445 386 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 PROM1O43490 865 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 SPATS1Q496A3 300 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 SAMD4BQ5PRF9 694 aaKnown RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 CPTPQ5TA50 214 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 SLC2A7Q6PXP3 512 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 NET1Q7Z628 596 aaPredicted RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 DHDDSQ86SQ9 333 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 CDC20BQ86Y33 519 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 CHDHQ8NE62 594 aaPredicted RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 TNIP2Q8NFZ5 429 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 OR8J2Q8NGG1 315 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 NEIL3Q8TAT5 605 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 GAL3ST4Q96RP7 486 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 RPF2Q9H7B2 306 aaKnown RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 DDX31Q9H8H2 851 aaKnown RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 FAM120CQ9NX05 1096 aaKnown RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 B4GALT7Q9UBV7 327 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 ATP6V1HQ9UI12 483 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 CNOT11Q9UKZ1 510 aaKnown RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 BOKQ9UMX3 212 aaPredicted RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 CHCHD2Q9Y6H1 151 aaPredicted RBP17.04■□□□□ 0.32
SNCB-202ENST00000393693 AKAP6Q13023 2319 aa17.04■□□□□ 0.32
SNCB-202ENST00000393693 FAM47E-STBD1D6RA91 191 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 ERN1O75460 977 aaKnown RBP17.03■□□□□ 0.32
SNCB-202ENST00000393693 FBXO45P0C2W1 286 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 BMP5P22003 454 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 FOXD4Q12950 439 aaPredicted RBP17.03■□□□□ 0.32
SNCB-202ENST00000393693 HEPACAMQ14CZ8 416 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 PAGE3Q5JUK9 113 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 C6orf10Q5SRN2 563 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 FAM71E1Q6IPT2 247 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 C8orf82Q6P1X6 216 aaPredicted RBP17.03■□□□□ 0.32
SNCB-202ENST00000393693 PGM2L1Q6PCE3 622 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 TMEM64Q6YI46 380 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 CAMKMTQ7Z624 323 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 SLC15A4Q8N697 577 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 GFM2Q969S9 779 aaKnown RBP17.03■□□□□ 0.32
SNCB-202ENST00000393693 RMND5BQ96G75 393 aaPredicted RBP17.03■□□□□ 0.32
SNCB-202ENST00000393693 FBXL20Q96IG2 436 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 SH3GL1Q99961 368 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 DUSP26Q9BV47 211 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 BHLHE41Q9C0J9 482 aaPredicted RBP17.03■□□□□ 0.32
SNCB-202ENST00000393693 ACKR4Q9NPB9 350 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 ERVK-19Q9WJR5 959 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 AP3M1Q9Y2T2 418 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 NCKAP5O14513 1909 aa17.03■□□□□ 0.32
SNCB-202ENST00000393693 A6NNC1 897 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 HSPB2A8KAH6 182 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 STAMBPO95630 424 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 ME2P23368 584 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 PLIN5Q00G26 463 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 DUSP8Q13202 625 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 ZNF267Q14586 743 aaPredicted RBP17.02■□□□□ 0.32
SNCB-202ENST00000393693 HSPB2Q16082 182 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 C10orf67Q8IYJ2 551 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 MMP21Q8N119 569 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 ZCCHC7Q8N3Z6 543 aaKnown RBP17.02■□□□□ 0.32
SNCB-202ENST00000393693 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.02■□□□□ 0.32
SNCB-202ENST00000393693 GTF2H4Q92759 462 aa17.02■□□□□ 0.32
SNCB-202ENST00000393693 UCN3Q969E3 161 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms