RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 RASL10AQ92737 203 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 N4BP2L2Q92802 583 aaPredicted RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 C4orf36Q96KX1 117 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF607Q96SK3 696 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 RBM4BQ9BQ04 359 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SLC39A3Q9BRY0 314 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 TUBGCP2Q9BSJ2 902 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ALG12Q9BV10 488 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SLC25A51Q9H1U9 297 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 LIME1Q9H400 295 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 GORASP2Q9H8Y8 452 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 IMPAD1Q9NX62 359 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 AIPL1Q9NZN9 384 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 MDFICQ9P1T7 246 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 TBK1Q9UHD2 729 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF346Q9UL40 294 aaKnown RBP2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 NPIPA1Q9UND3 350 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 RPH3ALQ9UNE2 315 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 SMC3Q9UQE7 1217 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 RNF24Q9Y225 148 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 NTNG1Q9Y2I2 539 aa2.38□□□□□ -2.03
TRAJ40-201ENST00000390497 IGHV3-16A0A0C4DH30 117 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 SH3BGRLO75368 114 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 SCGNO76038 276 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 IGHDP01880 384 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 PDHBP11177 359 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ANXA3P12429 323 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 SDC1P18827 310 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 NT5EP21589 574 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 IGFBP5P24593 272 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ELK3P41970 407 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 SSR1P43307 286 aaKnown RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 RGS4P49798 205 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 PLA2G16P53816 162 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ACTR1AP61163 376 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 CNTN2Q02246 1040 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 NCBP1Q09161 790 aaKnown RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 RIPPLY1Q0D2K3 151 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 RIPK1Q13546 671 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ABRAXAS2Q15018 415 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 PDK3Q15120 406 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 SYPL1Q16563 259 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 C17orf58Q2M2W7 97 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 MRGPRG-AS1Q2M3A8 158 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 CCDC152Q4G0S7 254 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 GLIPR1L2Q4G1C9 344 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ACER2Q5QJU3 275 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 LGSNQ5TDP6 509 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 TMEM225Q6GV28 225 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 RFWD3Q6PCD5 774 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 LANCL3Q6ZV70 420 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 STXBP4Q6ZWJ1 553 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 HSD11B1LQ7Z5J1 315 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 PARGQ86W56 976 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 IFNEQ86WN2 208 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF683Q8IZ20 524 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 FAM133AQ8N9E0 248 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 OR2T3Q8NH03 318 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 SDSLQ96GA7 329 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF599Q96NL3 588 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 MYCBPQ99417 103 aaPredicted RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ZSCAN5AQ9BUG6 496 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 POLR3FQ9H1D9 316 aaPredicted RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 GPN2Q9H9Y4 310 aaPredicted RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ADGRL4Q9HBW9 690 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 ELOVL2Q9NXB9 296 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 EHFQ9NZC4 300 aa2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 MRPS33Q9Y291 106 aaKnown RBP2.37□□□□□ -2.03
TRAJ40-201ENST00000390497 KANK1Q14678 1352 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 A0A1B0GTH9 108 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 OR6C65A6NJZ3 312 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 NUDT21O43809 227 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 GALR3O60755 368 aaPredicted RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 PALMO75781 387 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 JCHAINP01591 159 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 IGHV3-13P01766 116 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 IGHV3-9P01782 118 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 UGT2B4P06133 528 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF44P15621 663 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 PGCP20142 388 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ATP5A1P25705 553 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 RPL4P36578 427 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 GNPDA1P46926 289 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CEBPDP49716 269 aaPredicted RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 GSK3BP49841 420 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 AP3M2P53677 418 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 PJVKQ0ZLH3 352 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CHIT1Q13231 466 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 SNAI3Q3KNW1 292 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CELF3Q5SZQ8 465 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 OR8G2PQ6IF36 304 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CENPPQ6IPU0 288 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 PNCKQ6P2M8 343 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF841Q6ZN19 808 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 ZNF600Q6ZNG1 722 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 CYS1Q717R9 158 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 APTXQ7Z2E3 356 aaKnown RBP2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 DPY19L4Q7Z388 723 aa2.36□□□□□ -2.03
TRAJ40-201ENST00000390497 TMEM17Q86X19 198 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms