RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 C19orf81C9J6K1 198 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 NPIPA5E9PKD4 350 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 DNASE2O00115 360 aaPredicted RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 SCRG1O75711 98 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 IFI30P13284 250 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 ALOX12P18054 663 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 SDC1P18827 310 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 STARP49675 285 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 NLRP11P59045 1033 aaKnown RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 ST8SIA6P61647 398 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 KCNJ11Q14654 390 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 UGCGQ16739 394 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 PCOTHQ58A44 107 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 TMEM255AQ5JRV8 349 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 ZNF684Q5T5D7 378 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 PM20D1Q6GTS8 502 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 RBPMS2Q6ZRY4 209 aaKnown RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 C19orf35Q6ZS72 473 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 PIWIL3Q7Z3Z3 882 aaKnown RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 LCA5Q86VQ0 697 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 SKA3Q8IX90 412 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 MIR7-3HGQ8N6C7 128 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 FAM86B1Q8N7N1 296 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 SETD6Q8TBK2 473 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 CPXM1Q96SM3 734 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 S1PR3Q99500 378 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 FANCFQ9NPI8 374 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 PNO1Q9NRX1 252 aaKnown RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 ELOVL2Q9NXB9 296 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 CPSF2Q9P2I0 782 aaKnown RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 SPRR3Q9UBC9 169 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 ADD3Q9UEY8 706 aaKnown RBP-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 POMT1Q9Y6A1 747 aa-0.38□□□□□ -2.47
SNORA40-201ENST00000388090 COL6A6A6NMZ7 2263 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 TRBC2A0A5B9 178 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 RANBP6O60518 1105 aaKnown RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 PSMD10O75832 226 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 MBL2P11226 248 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 EZRP15311 586 aaKnown RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 ADORA2BP29275 332 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 HOXD13P35453 343 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 RAB28P51157 221 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 FLI1Q01543 452 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 GABPAQ06546 454 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 SMC1AQ14683 1233 aaKnown RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 GPAT3Q53EU6 434 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 DDI2Q5TDH0 399 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 FBXW9Q5XUX1 488 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 PRR5LQ6MZQ0 368 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 C1orf94Q6P1W5 598 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 ATRAIDQ6UW56 229 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 SMAP1Q8IYB5 467 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 LINC00518Q8N0U6 118 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 SPATA18Q8TC71 538 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 RMDN2Q96LZ7 410 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 ZNF559Q9BR84 538 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 CDC42EP4Q9H3Q1 356 aaKnown RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 DCTPP1Q9H773 170 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 TRIM45Q9H8W5 580 aaPredicted RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 EHFQ9NZC4 300 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 VPS18Q9P253 973 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 DCDC2Q9UHG0 476 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 NRBP1Q9UHY1 535 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 GNPTGQ9UJJ9 305 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 UBQLN1Q9UMX0 589 aaKnown RBP-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 TRPV2Q9Y5S1 764 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 PIKFYVEQ9Y2I7 2098 aa-0.39□□□□□ -2.47
SNORA40-201ENST00000388090 SYNJ2O15056 1496 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 IGKV1D-43A0A0B4J1Z2 117 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 TRBV7-9A0A0J9YWB2 115 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 PDLIM1O00151 329 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 ADAM20O43506 726 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 TSPAN9O75954 239 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 PGLSO95336 258 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 ECDO95905 644 aaPredicted RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 CHRNA1P02708 482 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 LINC00869P0C866 280 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 PNMA6AP0CW24 399 aaPredicted RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 CGB3P0DN86 165 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 PGAM1P18669 254 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 CYP3A5P20815 502 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 NMUP48645 174 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 GEMIN4P57678 1058 aaKnown RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 MRPS11P82912 194 aaKnown RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 SLC3A1Q07837 685 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 HSPA14Q0VDF9 509 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 CHAF1BQ13112 559 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 EXOSC7Q15024 291 aaKnown RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 RSPO1Q2MKA7 263 aaPredicted RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 TCHHL1Q5QJ38 904 aaPredicted RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 CCDC30Q5VVM6 783 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 TXNRD3NBQ6F5E7 133 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 MORN3Q6PF18 240 aaPredicted RBP-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 ZNF621Q6ZSS3 439 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 ANKRD46Q86W74 232 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 PGAM4Q8N0Y7 254 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 TAGAPQ8N103 731 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 GATSQ8NAP1 163 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 OR1P1Q8NH06 330 aa-0.4□□□□□ -2.47
SNORA40-201ENST00000388090 DNAJC1Q96KC8 554 aaKnown RBP-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms