RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 FREM1Q5H8C1 2179 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 OR2M5A3KFT3 312 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 SH3D21A4FU49 640 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 SLC22A20A6NK97 555 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 TMEM233B4DJY2 109 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 COPEO14579 308 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 PDPK1O15530 556 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 HCRTR2O43614 444 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 UROSP10746 265 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 GABRA3P34903 492 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 CRHR1P34998 444 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 GSTM5P46439 218 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 CLDN20P56880 219 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 MRPS22P82650 360 aaKnown RBP12.78□□□□□ -0.36
SHOX-202ENST00000381575 KIAA0040Q15053 153 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 GRAMD1BQ3KR37 738 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 CCDC153Q494R4 210 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 CYP27C1Q4G0S4 372 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 APOOLQ6UXV4 268 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 ZNF845Q96IR2 970 aaPredicted RBP12.78□□□□□ -0.36
SHOX-202ENST00000381575 ZFP3Q96NJ6 502 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 TSSK3Q96PN8 268 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 UCN2Q96RP3 112 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 PINK1Q9BXM7 581 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 OPN3Q9H1Y3 402 aaPredicted RBP12.78□□□□□ -0.36
SHOX-202ENST00000381575 PLEKHF2Q9H8W4 249 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 LRTM1Q9HBL6 345 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 Q9N2J8 555 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 TAS2R7Q9NYW3 318 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 BAIAP2L1Q9UHR4 511 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 PACSIN3Q9UKS6 424 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 GRID1Q9ULK0 1009 aa12.78□□□□□ -0.36
SHOX-202ENST00000381575 MRPS18CQ9Y3D5 142 aaKnown RBP12.78□□□□□ -0.36
SHOX-202ENST00000381575 A8MXE2 369 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 ATE1O95260 518 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 UTS2O95399 124 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 IL33O95760 270 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 RAF1P04049 648 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 HRGP04196 525 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 LINC00032P0C843 101 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 SDC1P18827 310 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 KRT4P19013 534 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 GPC1P35052 558 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 CCT5P48643 541 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 PRKAG1P54619 331 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 PPP2R2AP63151 447 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 RPL38P63173 70 aaKnown RBP12.77□□□□□ -0.37
SHOX-202ENST00000381575 FAM27E3Q08E93 113 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 KEAP1Q14145 624 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 PCLAFQ15004 111 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 ZNHIT3Q15649 155 aaPredicted RBP12.77□□□□□ -0.37
SHOX-202ENST00000381575 LIPMQ5VYY2 423 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 PPP4R4Q6NUP7 873 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 CHMP1BQ7LBR1 199 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 BTLAQ7Z6A9 289 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 GATSQ8NAP1 163 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
SHOX-202ENST00000381575 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 SLC9A6Q92581 669 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 STARD4Q96DR4 205 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 LMF2Q9BU23 707 aaKnown RBP12.77□□□□□ -0.37
SHOX-202ENST00000381575 GATA5Q9BWX5 397 aaPredicted RBP12.77□□□□□ -0.37
SHOX-202ENST00000381575 TUBB1Q9H4B7 451 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 C1orf109Q9NX04 203 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 FAM120CQ9NX05 1096 aaKnown RBP12.77□□□□□ -0.37
SHOX-202ENST00000381575 GIMAP2Q9UG22 337 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 ABCG2Q9UNQ0 655 aa12.77□□□□□ -0.37
SHOX-202ENST00000381575 AZIN1O14977 448 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 CHRNGP07510 517 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 PEPDP12955 493 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 DIO3P55073 304 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 PSPHP78330 225 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 GALNTL6Q49A17 601 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 Q6ZSR9 355 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 IKBIPQ70UQ0 350 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 ZAR1Q86SH2 424 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 MEIOBQ8N635 442 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 FNDC9Q8TBE3 224 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 AGR3Q8TD06 166 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 GPR151Q8TDV0 419 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 C1GALT1C1Q96EU7 318 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 DTNBP1Q96EV8 351 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 FAM111AQ96PZ2 611 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 ALPK1Q96QP1 1244 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 NPAS1Q99742 590 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 KLHDC3Q9BQ90 382 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 MECRQ9BV79 373 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 TBL1XR1Q9BZK7 514 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 ACBD3Q9H3P7 528 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 PIGMQ9H3S5 423 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
SHOX-202ENST00000381575 KLHL28Q9NXS3 571 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 C6orf203Q9P0P8 240 aaPredicted RBP12.76□□□□□ -0.37
SHOX-202ENST00000381575 VDAC3Q9Y277 283 aa12.76□□□□□ -0.37
SHOX-202ENST00000381575 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 SLC28A1O00337 649 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 SIAH2O43255 324 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 SLITRK5O94991 958 aa12.75□□□□□ -0.37
SHOX-202ENST00000381575 ANGPTL1O95841 491 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms