RNA–Protein interactions for RNA: ENST00000380874.3

FOXC1-201, Transcript of forkhead box C1, humanhuman

APPRIS P1 BASIC

Gene FOXC1, Length 3,926 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1-201ENST00000380874 HMGN1P05114 100 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 NDUFV2P19404 249 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 GABRA3P34903 492 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 SOX18P35713 384 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 TRIM23P36406 574 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 RPL4P36578 427 aaKnown RBP18.28■□□□□ 0.52
FOXC1-201ENST00000380874 SHC2P98077 582 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 C1orf61Q13536 156 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 PUS10Q3MIT2 529 aaKnown RBP18.28■□□□□ 0.52
FOXC1-201ENST00000380874 TBRG1Q3YBR2 411 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 LCN1P1Q5VSP4 162 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 ASB18Q6ZVZ8 466 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 CXXC5Q7LFL8 322 aaKnown RBP18.28■□□□□ 0.52
FOXC1-201ENST00000380874 KRT74Q7RTS7 529 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 TAF8Q7Z7C8 310 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 ATP6V1C2Q8NEY4 427 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 HMGB4Q8WW32 186 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 SLC22A18Q96BI1 424 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 CCDC32Q9BV29 185 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 PITHD1Q9GZP4 211 aaPredicted RBP18.28■□□□□ 0.52
FOXC1-201ENST00000380874 BTBD1Q9H0C5 482 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 TMEM27Q9HBJ8 222 aa18.28■□□□□ 0.52
FOXC1-201ENST00000380874 IGKV1-8A0A0C4DH67 115 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 NARSO43776 548 aaKnown RBP18.27■□□□□ 0.52
FOXC1-201ENST00000380874 GSTT2P0CG29 244 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 GSTT2BP0CG30 244 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 ACP2P11117 423 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 TEKQ02763 1124 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 DSG2Q14126 1118 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 EXOSC7Q15024 291 aaKnown RBP18.27■□□□□ 0.52
FOXC1-201ENST00000380874 MZT2AQ6P582 158 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 GDPGP1Q6ZNW5 385 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 SIAEQ9HAT2 523 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 PHF11Q9UIL8 331 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 A3GALT2U3KPV4 340 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 A0A1W2PPK0 400 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 SOCS6O14544 535 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 GMFGO60234 142 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 LINC00271P0C7V0 271 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 LIMS1P48059 325 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 C12orf73Q69YU5 71 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 FRMD1Q8N878 549 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 FAM98AQ8NCA5 519 aaKnown RBP18.27■□□□□ 0.52
FOXC1-201ENST00000380874 SPRYD4Q8WW59 207 aaPredicted RBP18.27■□□□□ 0.52
FOXC1-201ENST00000380874 TRMT61AQ96FX7 289 aaKnown RBP18.27■□□□□ 0.52
FOXC1-201ENST00000380874 SIGLEC11Q96RL6 698 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 SLC28A3Q9HAS3 691 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 FKBP14Q9NWM8 211 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 ADAM30Q9UKF2 790 aa18.27■□□□□ 0.52
FOXC1-201ENST00000380874 DIMT1Q9UNQ2 313 aaKnown RBP18.27■□□□□ 0.52
FOXC1-201ENST00000380874 ARRDC5A6NEK1 342 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 HLA-DPB1P04440 258 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 PIPP12273 146 aaPredicted RBP18.27■□□□□ 0.51
FOXC1-201ENST00000380874 VSX2P58304 361 aaPredicted RBP18.27■□□□□ 0.51
FOXC1-201ENST00000380874 TSPAN31Q12999 210 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 IRF3Q14653 427 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 FIGLAQ6QHK4 219 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 FAM26EQ8N5C1 309 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 OR1E3Q8WZA6 343 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 SLC35A4Q96G79 324 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 TTYH2Q9BSA4 534 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 NT5DC2Q9H857 520 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 HRASLS2Q9NWW9 162 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 NLGN3Q9NZ94 848 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 OR10H1Q9Y4A9 318 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 ASB4Q9Y574 426 aa18.27■□□□□ 0.51
FOXC1-201ENST00000380874 HYKKA2RU49 373 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 J3QLW9 94 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 RECKO95980 971 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 IFNA16P05015 189 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 ZNF19P17023 458 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 FUT1P19526 365 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 RCVRNP35243 200 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 PPP2CBP62714 309 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 PPP2CAP67775 309 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 MRPL28Q13084 256 aaKnown RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 E2F2Q14209 437 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 NLGN4YQ8NFZ3 816 aaPredicted RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 OR7G2Q8NG99 324 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 FANK1Q8TC84 345 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 PATE1Q8WXA2 126 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 ACOT11Q8WXI4 607 aaPredicted RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 PHF21AQ96BD5 680 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 TCF20Q9UGU0 1960 aaKnown RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 SPTBP11277 2137 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 ZC3H12DA2A288 527 aaKnown RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 HTR3EA5X5Y0 456 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 TSC22D2O75157 780 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 OCLNQ16625 522 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 MZT2BQ6NZ67 158 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 ATCAYQ86WG3 371 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 CAMKVQ8NCB2 501 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 BBS1Q8NFJ9 593 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 WDR92Q96MX6 357 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 WACQ9BTA9 647 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 RSPH9Q9H1X1 276 aaPredicted RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 SLC38A1Q9H2H9 487 aa18.26■□□□□ 0.51
FOXC1-201ENST00000380874 USP36Q9P275 1121 aaKnown RBP18.26■□□□□ 0.51
FOXC1-201ENST00000380874 HEATR5BQ9P2D3 2071 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms