RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZBTB11O95625 1053 aaPredicted RBP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ST6GAL1P15907 406 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 CSTF2P33240 577 aaKnown RBP eCLIP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 LIPAP38571 399 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 STAT5AP42229 794 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 CAPZBP47756 277 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 GIPRP48546 466 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 PCYT1AP49585 367 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 CLK1P49759 484 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 STARD6P59095 220 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 SNRPNP63162 240 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 C1orf61Q13536 156 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 GINS1Q14691 196 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 PRICKLE4Q2TBC4 344 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 PRTGQ2VWP7 1150 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 DCST2Q5T1A1 773 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF730Q6ZMV8 503 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF836Q6ZNA1 936 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 USP43Q70EL4 1123 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 MRGPREQ86SM8 312 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ADCK1Q86TW2 530 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 OR4N5Q8IXE1 308 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 NLGN4XQ8N0W4 816 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 COX18Q8N8Q8 333 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 KBTBD8Q8NFY9 601 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 TEX47Q8TBZ9 253 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 FNDC8Q8TC99 324 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 HOXB13Q92826 284 aaPredicted RBP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 CTHRC1Q96CG8 243 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 ZHX1-C8orf76Q96EF9 292 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 TCTN2Q96GX1 697 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 TMEM80Q96HE8 168 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 QRSL1Q9H0R6 528 aaKnown RBP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 MAT2BQ9NZL9 334 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 SELENONQ9NZV5 590 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 CLCA2Q9UQC9 943 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 CHST2Q9Y4C5 530 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 A3GALT2U3KPV4 340 aa9.76□□□□□ -0.85
POLR2J3-201ENST00000379340 A0A1B0GVG6 124 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CPSF4LA6NMK7 179 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CLDN25C9JDP6 229 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 KIAA0513O60268 411 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 FCMRO60667 390 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZIC2O95409 532 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 RNH1P13489 461 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZNF12P17014 697 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TNNI3P19429 210 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NR4A1P22736 598 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 FPR3P25089 353 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MAP3K8P41279 467 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 AVPR1BP47901 424 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 BMXP51813 675 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 VBP1P61758 197 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 RACK1P63244 317 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 EEF1A1P68104 462 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 POU6F2P78424 691 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MAP4K2Q12851 820 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 FOXD4Q12950 439 aaPredicted RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NR1D2Q14995 579 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 LPAL2Q16609 132 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZSWIM7Q19AV6 140 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TRMT12Q53H54 448 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ARMCX4Q5H9R4 360 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 GARNL3Q5VVW2 1013 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC27A4Q6P1M0 643 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 PRSS41Q7RTY9 318 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MCATQ8IVS2 390 aaKnown RBP9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CYP4Z2PQ8N1L4 340 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ARHGEF39Q8N4T4 335 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CLDN22Q8N7P3 220 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TCEANCQ8N8B7 351 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ZBTB44Q8NCP5 570 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC41A3Q96GZ6 507 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SHDQ96IW2 340 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SLC38A2Q96QD8 506 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 IL4I1Q96RQ9 567 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NELL2Q99435 816 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MND1Q9BWT6 205 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CHRNA10Q9GZZ6 450 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ANKRA2Q9H9E1 313 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ADAP2Q9NPF8 381 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 FBXO8Q9NRD0 319 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 SEMA4GQ9NTN9 838 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 MED17Q9NVC6 651 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 C14orf105Q9NVL8 296 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TVP23BQ9NYZ1 205 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 NLGN3Q9NZ94 848 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 EPHA6Q9UF33 1036 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 OSGIN1Q9UJX0 560 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 DOLKQ9UPQ8 538 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 ERGIC3Q9Y282 383 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TTC36A6NLP5 189 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 M0R129 80 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 LAMTOR5O43504 91 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 CHST10O43529 356 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 TPST2O60704 377 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 LDB3O75112 727 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 DNAJB6O75190 326 aa9.75□□□□□ -0.85
POLR2J3-201ENST00000379340 RDH16O75452 317 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms