RNA–Protein interactions for RNA: ENST00000375441.7

CUL4A-203, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 4,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-203ENST00000375441 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 FFAR1O14842 300 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ARL6IP5O75915 188 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ARSBP15848 533 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 HIST1H1TP22492 207 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 KIR2DL3P43628 341 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 HNRNPA1L2Q32P51 320 aaKnown RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 C7orf61Q8IZ16 206 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SLC44A3Q8N4M1 653 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 OR5H6Q8NGV6 325 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 MED20Q9H944 212 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 PCDHGB7Q9Y5F8 929 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TEX13CA0A0J9YWL9 993 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 FLRT2O43155 660 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 EDNRAP25101 427 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SOX18P35713 384 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TRIM23P36406 574 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 PITPNBP48739 271 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SNTB2Q13425 540 aaKnown RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 PDGFRLQ15198 375 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TCEAL5Q5H9L2 206 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ZNF362Q5T0B9 420 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 LHX8Q68G74 356 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 C12orf73Q69YU5 71 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ZNF655Q8N720 491 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ACTRT3Q9BYD9 372 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 MRPL15Q9P015 296 aaKnown RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 IKZF2Q9UKS7 526 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TRDV1A0A1B0GX56 115 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TMEM129A0AVI4 362 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SOCS6O14544 535 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 PPM1DO15297 605 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 IFNA7P01567 189 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 CHRNB1P11230 501 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 DRD5P21918 477 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 DNASE1P24855 282 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SLC6A11P48066 632 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 MVDP53602 400 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 RRAS2P62070 204 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 MPEG1Q2M385 716 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 MTFR2Q6P444 385 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 OR5K2Q8NHB8 316 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 C1orf216Q8TAB5 229 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 DPCDQ9BVM2 203 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 NXF2Q9GZY0 626 aaKnown RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 BABAM2Q9NXR7 383 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 LRRN3E7EW58 273 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 LRRTM2O43300 516 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 CD3GP09693 182 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 BMPR1AP36894 532 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SEC13P55735 322 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 TAS2R43P59537 309 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 PRDX1Q06830 199 aaKnown RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 FGFBP1Q14512 234 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 RASSF6Q6ZTQ3 369 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 OAFQ86UD1 273 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 OR5W2Q8NH69 310 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 KIAA1143Q96AT1 154 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 ERMAPQ96PL5 475 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 FUZQ9BT04 418 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 LRRN3Q9H3W5 708 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 RANBP3Q9H6Z4 567 aaPredicted RBP12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SLAMF7Q9NQ25 335 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 FKBP14Q9NWM8 211 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 MAU2Q9Y6X3 613 aa12.34□□□□□ -0.43
CUL4A-203ENST00000375441 SLC22A31A6NKX4 558 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 ALX3O95076 343 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 GKN3PP0CG01 181 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 GABRB1P18505 474 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 NAA10P41227 235 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 CCR2P41597 374 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 ACTR1BP42025 376 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 METAP1P53582 386 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 CRYBA2P53672 197 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 ACTR1AP61163 376 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 P2RY14Q15391 338 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 CCNJQ5T5M9 372 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 C18orf63Q68DL7 685 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 FIGNL1Q6PIW4 674 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 METAP1DQ6UB28 335 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 LRRC25Q8N386 305 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 C12orf76Q8N812 135 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 ZNF784Q8NCA9 323 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 NLGN4YQ8NFZ3 816 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 ST6GAL2Q96JF0 529 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 MTHFD2LQ9H903 347 aaPredicted RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 SLC28A3Q9HAS3 691 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 GNG8Q9UK08 70 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 EXO1Q9UQ84 846 aaKnown RBP12.33□□□□□ -0.44
CUL4A-203ENST00000375441 CDH10Q9Y6N8 788 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 RASGRP1O95267 797 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 CRYZL1O95825 349 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 LGI1O95970 557 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 IFNA16P05015 189 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 BSGP35613 385 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 CDK3Q00526 305 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 SLC39A5Q6ZMH5 540 aa12.33□□□□□ -0.44
CUL4A-203ENST00000375441 PARGQ86W56 976 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms