RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ACSM3Q53FZ2 586 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 METTL27Q8N6F8 245 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 HORMAD2Q8N7B1 307 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 ACOT4Q8N9L9 421 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 MSLNLQ96KJ4 702 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 C11orf49Q9H6J7 331 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 NUMBLQ9Y6R0 609 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 ARPC5O15511 151 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 ADAM12O43184 909 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 H2BFMP0C1H6 154 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 PVALBP20472 110 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CERS1P27544 350 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 AHRP35869 848 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 LIPAP38571 399 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 RPS5P46782 204 aaKnown RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 ACTBP60709 375 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 ACTG1P63261 375 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM205Q6UW68 189 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 COMMD7Q86VX2 200 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 NLGN4XQ8N0W4 816 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 C12orf76Q8N812 135 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 CDRT4Q8N9R6 151 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TSTD1Q8NFU3 115 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 OR4K17Q8NGC6 315 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 UBE2FQ969M7 185 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 AIFM2Q9BRQ8 373 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 AMBRA1Q9C0C7 1298 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 RANGRFQ9HD47 186 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-203ENST00000375274 VNN3Q9NY84 501 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 TAS2R16Q9NYV7 291 aa10.89□□□□□ -0.67
PTCH1-203ENST00000375274 IGLV3-10A0A075B6K4 115 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 C1orf105O95561 183 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 CRYZL1O95825 349 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TFP02787 698 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 ACP2P11117 423 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FGL1Q08830 312 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 CST6Q15828 149 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TAS1R1Q7RTX1 841 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 PDZD3Q86UT5 571 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 LAX1Q8IWV1 398 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 LINC01465Q8N7H1 131 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FAM83FQ8NEG4 500 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM163Q8TC26 289 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TMEM234Q8WY98 164 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 CNOT9Q92600 299 aaKnown RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 OR5M11Q96RB7 305 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 IL21RQ9HBE5 538 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 BABAM2Q9NXR7 383 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 MRPS17Q9Y2R5 130 aaKnown RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TRAV18A0A075B6X5 111 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TRBV4-1A0A0J9YWV2 114 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FXYD1O00168 92 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 RNGTTO60942 597 aaKnown RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 CLEC3AO75596 197 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 SLC35A2P78381 396 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 ARHGAP19Q14CB8 494 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 TSC22D1Q15714 1073 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 LEG1Q6P5S2 330 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 HTR3DQ70Z44 454 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 OR4F15Q8NGB8 312 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 OLIG1Q8TAK6 271 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 UBTD2Q8WUN7 234 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FOXJ1Q92949 421 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 RP1L1Q8IWN7 2480 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 METTL15A6NJ78 407 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 HEPACAM2A8MVW5 462 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FAM155AB1AL88 458 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 KLKB1P03952 638 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 PET100P0DJ07 73 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 CTXN1P60606 82 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 NTHL1P78549 312 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 OCLNQ16625 522 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 GXYLT1Q4G148 440 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 OTUD1Q5VV17 481 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 KDM4DQ6B0I6 523 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FCRLBQ6BAA4 426 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 ALKBH2Q6NS38 261 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 FIGLAQ6QHK4 219 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 DPPA4Q7L190 304 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 LRRC28Q86X40 367 aaPredicted RBP10.88□□□□□ -0.67
PTCH1-203ENST00000375274 DTD2Q96FN9 168 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 OR52D1Q9H346 318 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 RNF186Q9NXI6 227 aa10.88□□□□□ -0.67
PTCH1-203ENST00000375274 A0A0G2JMP0 313 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 OR5K4A6NMS3 321 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PRAF2O60831 178 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 IDUAP35475 653 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PRLHRP49683 370 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 RIDAP52758 137 aaKnown RBP10.87□□□□□ -0.67
PTCH1-203ENST00000375274 CAV3P56539 151 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 LRRC26Q2I0M4 334 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 TBC1D25Q3MII6 688 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 ATAD3CQ5T2N8 411 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 DGLUCYQ7Z3D6 616 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 TMPRSS9Q7Z410 1059 aa10.87□□□□□ -0.67
PTCH1-203ENST00000375274 LYSMD2Q8IV50 215 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms