RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 KLHL3Q9UH77 587 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 HEMK1Q9Y5R4 338 aaPredicted RBP16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SDK1Q7Z5N4 2213 aa16.74■□□□□ 0.27
HLA-DQB1-201ENST00000374943 A0A087WUU8 490 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CPSF4LA6NMK7 179 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CLCA1A8K7I4 914 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 NOL3O60936 208 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CD1CP29017 333 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CSF2RBP32927 897 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GABRA3P34903 492 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TRHRP34981 398 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MASP1P48740 699 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 EMDP50402 254 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SNRPGP62308 76 aaKnown RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZNHIT3Q15649 155 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SYT16Q17RD7 645 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 WDR74Q6RFH5 385 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 AHSA2Q719I0 299 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 NLGN4XQ8N0W4 816 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RAB2BQ8WUD1 216 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MYDGFQ969H8 173 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SLC41A2Q96JW4 573 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 VSTM2LQ96N03 204 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MCHR1Q99705 422 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CUTCQ9NTM9 273 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 NLGN3Q9NZ94 848 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TMEM184BQ9Y519 407 aaPredicted RBP16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FER1L5A0AVI2 2057 aa16.73■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CENPVL1A0A0U1RR11 272 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GXYLT2A0PJZ3 443 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PRAMEF2O60811 474 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR2B3O76000 313 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 INMTO95050 263 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 EPHA8P29322 1005 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 DHPSP49366 369 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZNF136P52737 540 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PSG6Q00889 435 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SERTAD2Q14140 314 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 KCNAB1Q14722 419 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MAPK14Q16539 360 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 DECR1Q16698 335 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TMEM201Q5SNT2 666 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SYT6Q5T7P8 510 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TMEM236Q5W0B7 351 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PLEKHM3Q6ZWE6 761 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 KANSL1Q7Z3B3 1105 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GNPDA2Q8TDQ7 276 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TRUB1Q8WWH5 349 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RORBQ92753 470 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 COPS4Q9BT78 406 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ACOT13Q9NPJ3 140 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CTPS2Q9NRF8 586 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SUSD2Q9UGT4 822 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 KCNE5Q9UJ90 142 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CDHR4A6H8M9 788 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TTC36A6NLP5 189 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FMO6PO60774 539 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 KCNK2O95069 426 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PNLIPP16233 465 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 POU1F1P28069 291 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ARL4DP49703 201 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BTG2P78543 158 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ZXDAP98168 799 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FUT7Q11130 342 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PTCHD4Q6ZW05 846 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 RANBP3LQ86VV4 465 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ACOT11Q8WXI4 607 aaPredicted RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FCGR1BQ92637 280 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GGHQ92820 318 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 BCL7BQ9BQE9 202 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 LRFN3Q9BTN0 628 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 PRR14Q9BWN1 585 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 NAA50Q9GZZ1 169 aaKnown RBP16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FBXO34Q9NWN3 711 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MMACHCQ9Y4U1 282 aa16.72■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CLDN24A6NM45 220 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TMEM150CB9EJG8 249 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 H3BN98 237 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CDC123O75794 336 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ATE1O95260 518 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SOX14O95416 240 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CDK1P06493 297 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SEPHS1P49903 392 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 TBCEQ15813 527 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 AMZ1Q400G9 498 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 MRPL2Q5T653 305 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 UBE2UQ5VVX9 321 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 FIGNL1Q6PIW4 674 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GDF7Q7Z4P5 450 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 METTL27Q8N6F8 245 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 SLC41A3Q96GZ6 507 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 OR1F2PQ96R84 312 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GPA33Q99795 319 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 DUSP23Q9BVJ7 150 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 ARMC7Q9H6L4 198 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 GPN2Q9H9Y4 310 aaPredicted RBP16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 LIN28AQ9H9Z2 209 aaKnown RBP16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 C11orf16Q9NQ32 467 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 LANCL2Q9NS86 450 aa16.71■□□□□ 0.27
HLA-DQB1-201ENST00000374943 CLN6Q9NWW5 311 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms