RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 TMEM179BQ7Z7N9 219 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 BOLLQ8N9W6 283 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 MFSD2AQ8NA29 543 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 NRSN2Q9GZP1 204 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 SAP130Q9H0E3 1048 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 PARPBPQ9NWS1 579 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 NAALAD2Q9Y3Q0 740 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 ATG4BQ9Y4P1 393 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 PCDHGB6Q9Y5F9 930 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 PCDHGA2Q9Y5H1 932 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 MDC1Q14676 2089 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 SEC14L5O43304 696 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 HPRP00739 348 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 F13BP05160 661 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 HNRNPA1P09651 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 SMIM18P0DKX4 95 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 HIST1H1TP22492 207 aaPredicted RBP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 FAUP35544 74 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 CTXN1P60606 82 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 RELAQ04206 551 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 ADAM15Q13444 863 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 EOGTQ5NDL2 527 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 PAQR6Q6TCH4 344 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 ANKRD13BQ86YJ7 626 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 GALNT11Q8NCW6 608 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 OR4K17Q8NGC6 315 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 OR5T3Q8NGG3 340 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 TRUB1Q8WWH5 349 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF225Q9UK10 706 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 CNOT11Q9UKZ1 510 aaKnown RBP8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 GPR34Q9UPC5 381 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 HS3ST2Q9Y278 367 aa8.57□□□□□ -1.04
SMARCA1-202ENST00000371122 SNRNP200O75643 2136 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 LOC102723532A0A0G2JNH3 316 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 A0A1W2PPL8 197 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DCDC2BA2VCK2 349 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TEX46H3BTG2 121 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DLGAP1O14490 977 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 IGLV3-25P01717 112 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 GP1BBP13224 206 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 CPMP14384 443 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PRKCAP17252 672 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ITIH1P19827 911 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 C5AR1P21730 350 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ITGB7P26010 798 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TGM4P49221 684 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 NRG3P56975 720 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 FCHO2Q0JRZ9 810 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SGCAQ16586 387 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 BCL2L15Q5TBC7 163 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 FAM69BQ5VUD6 431 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ASTLQ6HA08 431 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZCCHC12Q6PEW1 402 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SPRED2Q7Z698 418 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PDZD3Q86UT5 571 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 FAM160A2Q8N612 972 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF615Q8N8J6 731 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SLC16A11Q8NCK7 471 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 FAM83FQ8NEG4 500 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 OR2AJ1Q8NGZ0 328 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 CEP76Q8TAP6 659 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ASB12Q8WXK4 309 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 RAB7BQ96AH8 199 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TOE1Q96GM8 510 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 CMKLR1Q99788 373 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SLC2A11Q9BYW1 496 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 GORASP2Q9H8Y8 452 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DIABLOQ9NR28 239 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 NCDNQ9UBB6 729 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SLC23A2Q9UGH3 650 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ANKRD61A6NGH8 418 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TARM1B6A8C7 271 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 NPIPA5E9PKD4 350 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ITGA10O75578 1167 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 GIPRP48546 466 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PRLHRP49683 370 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PPP5CP53041 499 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PRDX1Q06830 199 aaKnown RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SLC14A1Q13336 389 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 C1QTNF12Q5T7M4 302 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 LEG1Q6P5S2 330 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DPPA4Q7L190 304 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 BHLHA9Q7RTU4 235 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 MCEMP1Q8IX19 187 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 OR6T1Q8NGN1 323 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF431Q8TF32 576 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SPRYD4Q8WW59 207 aaPredicted RBP8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 TRIB3Q96RU7 358 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 OR10A4Q9H209 315 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 CWH43Q9H720 699 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 PRSS16Q9NQE7 514 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 NPIPA1Q9UND3 350 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZSWIM8A7E2V4 1837 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 DOCK5Q9H7D0 1870 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 MED12Q93074 2177 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ZNF878C9JN71 531 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 ARL6IP5O75915 188 aa8.56□□□□□ -1.04
SMARCA1-202ENST00000371122 SCGB1D2O95969 90 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms