RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 GFRA1P56159 465 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 MAD2L1Q13257 205 aaPredicted RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 MLC1Q15049 377 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 GRAMD1BQ3KR37 738 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 VPS26BQ4G0F5 336 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 CPTPQ5TA50 214 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 NSUN5P2Q63ZY6 315 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 FADS6Q8N9I5 356 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 RELL2Q8NC24 303 aaPredicted RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 TNIP2Q8NFZ5 429 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 CEP70Q8NHQ1 597 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 FAM120BQ96EK7 910 aaKnown RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 DTNBP1Q96EV8 351 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 TRIB1Q96RU8 372 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 PAIP2Q9BPZ3 127 aaKnown RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 TREX2Q9BQ50 279 aaPredicted RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 YIPF4Q9BSR8 244 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 C3orf14Q9HBI5 128 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 ZCCHC3Q9NUD5 404 aaKnown RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 ATAD3AQ9NVI7 634 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 ASIC5Q9NY37 505 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 NOP53Q9NZM5 478 aaKnown RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 HAO1Q9UJM8 370 aa9.41□□□□□ -0.9
YBX3-203ENST00000366286 EIF3LQ9Y262 564 aaKnown RBP9.41□□□□□ -0.9
YBX3-203ENST00000366286 A0A1W2PRB8 838 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 TMEM120BA0PK00 339 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 HSPB2A8KAH6 182 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 H0Y3Z8 333 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 ERLIN1O75477 346 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 SNUPNO95149 360 aaKnown RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 C6orf47O95873 294 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 ALOX5P09917 674 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 PRPS1L1P21108 318 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 DPP4P27487 766 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 CEACAM8P31997 349 aaPredicted RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 TIMP3P35625 211 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 LHX2P50458 406 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 RPL14P50914 215 aaKnown RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 DSCR4P56555 118 aaPredicted RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 C21orf58P58505 322 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 PRR5P85299 388 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 EMX2Q04743 252 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 BST1Q10588 318 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 STX3Q13277 289 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 LASP1Q14847 261 aaKnown RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 HSPB2Q16082 182 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 DUSP5Q16690 384 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 SLC25A35Q3KQZ1 300 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 EXOSC6Q5RKV6 272 aaKnown RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 BEND6Q5SZJ8 279 aaPredicted RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 HHATQ5VTY9 493 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 ZAR1Q86SH2 424 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 MARCH3Q86UD3 253 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 TRIM42Q8IWZ5 723 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 RIMKLAQ8IXN7 391 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 COX18Q8N8Q8 333 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 SLC16A11Q8NCK7 471 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 OR2M3Q8NG83 312 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 JADE3Q92613 823 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 COQ8BQ96D53 544 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 C16orf58Q96GQ5 468 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 SFXN2Q96NB2 322 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 TUBA1CQ9BQE3 449 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 TBL1XR1Q9BZK7 514 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 DSN1Q9H410 356 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 CXorf36Q9H7Y0 433 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 AKTIPQ9H8T0 292 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 MED11Q9P086 117 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 RPH3AQ9Y2J0 694 aaPredicted RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.9
YBX3-203ENST00000366286 SNX8Q9Y5X2 465 aa9.4□□□□□ -0.9
YBX3-203ENST00000366286 LRBAP50851 2863 aa9.4□□□□□ -0.91
YBX3-203ENST00000366286 MBD3L4A6NDZ8 208 aaPredicted RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 MBD3L3A6NE82 208 aaPredicted RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 MBD3L5A6NJ08 208 aaPredicted RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 CD8B2A6NJW9 211 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 ZIC3O60481 467 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 KCNK2O95069 426 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 OXSR1O95747 527 aaPredicted RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 ANGPTL1O95841 491 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 IL2RAP01589 272 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 CPN1P15169 458 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 HK1P19367 917 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 BMP5P22003 454 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 SSTR2P30874 369 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 PRIM2P49643 509 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 STARP49675 285 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 CLK3P49761 638 aaKnown RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 ZNF136P52737 540 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 DIO3P55073 304 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 CLDN8P56748 225 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 CLDN18P56856 261 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 WDR4P57081 412 aaKnown RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 B3GALT5-AS1P59052 145 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 MAGOHP61326 146 aaKnown RBP9.39□□□□□ -0.91
YBX3-203ENST00000366286 SRYQ05066 204 aa9.39□□□□□ -0.91
YBX3-203ENST00000366286 TP53BP2Q13625 1128 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms