RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 MEDAGQ5VYS4 303 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 UNC5DQ6UXZ4 953 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 FBXO16Q8IX29 292 aaPredicted RBP3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 C9orf40Q8IXQ3 194 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 GPR137CQ8N3F9 429 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 CERS5Q8N5B7 392 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 ZNF525Q8N782 197 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 SELENOMQ8WWX9 145 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 BADQ92934 168 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 ELMO2Q96JJ3 720 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 CNOT6LQ96LI5 555 aaKnown RBP3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 TESK2Q96S53 571 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 TMEM121Q9BTD3 319 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 TSSK1BQ9BXA7 367 aa3.11□□□□□ -1.91
RNU6-560P-201ENST00000364007 ANKRD30BLA7E2S9 258 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 LANCL1O43813 399 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 VPS26AO75436 327 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 P0C879 139 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 XRCC1P18887 633 aaPredicted RBP3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 CYLC1P35663 651 aaPredicted RBP3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 RPL4P36578 427 aaKnown RBP3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 BPIFB3P59826 476 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 CYP51A1Q16850 503 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 GLYR1Q49A26 553 aaPredicted RBP3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 FAM120AOSQ5T036 256 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 FHL5Q5TD97 284 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 UFSP1Q6NVU6 142 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 STAC2Q6ZMT1 411 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 ZNF677Q86XU0 584 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 EFCAB13Q8IY85 973 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 CSNK1A1LQ8N752 337 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 GIPC3Q8TF64 312 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 VSTM2LQ96N03 204 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 LPAR2Q9HBW0 351 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 VAT1LQ9HCJ6 419 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 RBM28Q9NW13 759 aaKnown RBP3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 VNN3Q9NY84 501 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 DPM3Q9P2X0 92 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 ATXN10Q9UBB4 475 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 MGAT4BQ9UQ53 548 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 KIF25-AS1Q9Y6Z4 181 aa3.1□□□□□ -1.91
RNU6-560P-201ENST00000364007 RLFQ13129 1914 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 CDX4O14627 284 aaPredicted RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 HAT1O14929 419 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 RAMP1O60894 148 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 AKR7A3O95154 331 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 ARF4P18085 180 aaPredicted RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 ZBTB25P24278 435 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 PTGFRP43088 359 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 NOVA1P51513 510 aaKnown RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 MTTPP55157 894 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 HSF2Q03933 536 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 DPYSL3Q14195 570 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 TRIP10Q15642 601 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 LHFPL4Q7Z7J7 247 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 MISPQ8IVT2 679 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 UBQLNLQ8IYU4 475 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 BPIFB2Q8N4F0 458 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 ANKRD20A12PQ8NF67 263 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 ARNTL2Q8WYA1 636 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 C18orf25Q96B23 403 aaPredicted RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 UPRTQ96BW1 309 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 DHTKD1Q96HY7 919 aaPredicted RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 DPH7Q9BTV6 452 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 YTHDF1Q9BYJ9 559 aaKnown RBP3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 CCSER1Q9C0I3 900 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 COMMD4Q9H0A8 199 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 SLC25A51Q9H1U9 297 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 ACTR3BQ9P1U1 418 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 ATP6V1HQ9UI12 483 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 L3MBTL1Q9Y468 752 aa3.09□□□□□ -1.91
RNU6-560P-201ENST00000364007 FRMPD3Q5JV73 1810 aa3.09□□□□□ -1.92
RNU6-560P-201ENST00000364007 IGLV8-61A0A075B6I0 122 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 SAGE2PA6NJ88 616 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 LRRC30A6NM36 301 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 E9PLD3 99 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 SDHDO14521 159 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 SCGB2A1O75556 95 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 H2AFZP0C0S5 128 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 DNAH10OSP0CZ25 163 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 UQCRBP14927 111 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 CCND2P30279 289 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 PRKAR2BP31323 418 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 EMDP50402 254 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 LIM2P55344 173 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 ZNF154Q13106 437 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 KCNJ11Q14654 390 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 KIAA0040Q15053 153 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 DCAF4L1Q3SXM0 396 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 TTC31Q49AM3 519 aaPredicted RBP3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 TMEM184AQ6ZMB5 413 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 HSD11B1LQ7Z5J1 315 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 CEND1Q8N111 149 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 STKLD1Q8NE28 680 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 OR13F1Q8NGS4 319 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 FAF2Q96CS3 445 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 MAPKAP1Q9BPZ7 522 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 TBCDQ9BTW9 1192 aa3.08□□□□□ -1.92
RNU6-560P-201ENST00000364007 POLR3FQ9H1D9 316 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms