RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ASB15Q8WXK1 588 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PMM1Q92871 262 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SPACA9Q96E40 222 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 TMEM19Q96HH6 336 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 COL21A1Q96P44 957 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 THTPAQ9BU02 230 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 RNF32Q9H0A6 362 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 SLC38A1Q9H2H9 487 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 ZBTB20Q9HC78 741 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CALML5Q9NZT1 146 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 PCDHGA9Q9Y5G4 932 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CNTRLQ7Z7A1 2325 aa11.42□□□□□ -0.58
NIF3L1-201ENST00000359683 CPAMD8Q8IZJ3 1885 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 GCN1Q92616 2671 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 A0A0G2JPF8 293 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 ELOVL7A1L3X0 281 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HNRNPCL2B2RXH8 293 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HNRNPCL3B7ZW38 293 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 GPR37O15354 613 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 UGT2B11O75310 529 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 PGM3O95394 542 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 H6PDO95479 791 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 BCHEP06276 602 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HNRNPCL4P0DMR1 293 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HTR1EP28566 365 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 KRT20P35900 424 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 TMED10P49755 219 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HLCSP50747 726 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 CRISP3P54108 245 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 CHRNEQ04844 493 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 SCARB2Q14108 478 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 TYW3Q6IPR3 259 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 REEP3Q6NUK4 255 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 PCSK4Q6UW60 755 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 FRRS1Q6ZNA5 592 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 LINC00696Q6ZRV3 163 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 OLIG3Q7RTU3 272 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 SLC30A8Q8IWU4 369 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 LSM14AQ8ND56 463 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HIPK4Q8NE63 616 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 NFKBIDQ8NI38 313 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 TTC9Q92623 222 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HAS2Q92819 552 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 HGDQ93099 445 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 EFHD2Q96C19 240 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 ADOQ96SZ5 270 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 KCTD14Q9BQ13 255 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 TREX2Q9BQ50 279 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 RUBCNLQ9H714 662 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 MTHFD2LQ9H903 347 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 ABI3Q9P2A4 366 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 WDR45Q9Y484 360 aa11.41□□□□□ -0.58
NIF3L1-201ENST00000359683 COL6A6A6NMZ7 2263 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 DSPPQ9NZW4 1301 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 NPIPB9F8W1W9 429 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 GCM2O75603 506 aaPredicted RBP11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 WDPCPO95876 746 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 CYP4B1P13584 511 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 ATP6V1C1P21283 382 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 IL12BP29460 328 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 PGM1P36871 562 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 CD96P40200 585 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 CYB561P49447 251 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 ST13P50502 369 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 PCBP3P57721 371 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 FBXW4P57775 412 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 TUBA3CQ13748 450 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 EFR3AQ14156 821 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 DESI1Q6ICB0 168 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 TUBA3EQ6PEY2 450 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 IL20RBQ6UXL0 311 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 CCDC80Q76M96 950 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 GALNT10Q86SR1 603 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF227Q86WZ6 799 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 FBXW8Q8N3Y1 598 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 ZNF843Q8N446 348 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 TNIP2Q8NFZ5 429 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 EXTL1Q92935 676 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 ZG16BQ96DA0 208 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 CLPTM1LQ96KA5 538 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 SGCZQ96LD1 299 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 HOXD1Q9GZZ0 328 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 MMADHCQ9H3L0 296 aaPredicted RBP11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 SH2D2AQ9NP31 389 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 HPF1Q9NWY4 346 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 MKLN1Q9UL63 735 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 MGAQ8IWI9 3026 aa11.4□□□□□ -0.58
NIF3L1-201ENST00000359683 C5orf58C9J3I9 102 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 MKRN2OSH3BPM6 223 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 RRP9O43818 475 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 KIAA0513O60268 411 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 NGFRP08138 427 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 ETS2P15036 469 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 ME2P23368 584 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 RFX3P48380 749 aa11.39□□□□□ -0.59
NIF3L1-201ENST00000359683 ATP12AP54707 1039 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms