RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 CSF2RBP32927 897 aa16.4■□□□□ 0.22
NPAS3-202ENST00000356141 VBP1P61758 197 aa16.4■□□□□ 0.22
NPAS3-202ENST00000356141 SLC35A2P78381 396 aa16.4■□□□□ 0.22
NPAS3-202ENST00000356141 ZC3H12BQ5HYM0 836 aaKnown RBP16.4■□□□□ 0.22
NPAS3-202ENST00000356141 TMPRSS9Q7Z410 1059 aa16.4■□□□□ 0.22
NPAS3-202ENST00000356141 PDE7BQ9NP56 450 aa16.4■□□□□ 0.22
NPAS3-202ENST00000356141 SLC7A7Q9UM01 511 aa16.4■□□□□ 0.22
NPAS3-202ENST00000356141 ZNF443Q9Y2A4 671 aaPredicted RBP16.4■□□□□ 0.22
NPAS3-202ENST00000356141 TMEM131Q92545 1883 aa16.39■□□□□ 0.22
NPAS3-202ENST00000356141 SH3PXD2BA1X283 911 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 TRIM64A6NGJ6 449 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 RGS10O43665 173 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 OR2B3O76000 313 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 CBX7O95931 251 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 ALOX5P09917 674 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 GSTM5P46439 218 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 FASLGP48023 281 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 MRPL2Q5T653 305 aaKnown RBP16.39■□□□□ 0.21
NPAS3-202ENST00000356141 RRM2BQ7LG56 351 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 DNAJC22Q8N4W6 341 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 OR13F1Q8NGS4 319 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 OR51Q1Q8NH59 317 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 ATOH1Q92858 354 aaPredicted RBP16.39■□□□□ 0.21
NPAS3-202ENST00000356141 GABARAPL3Q9BY60 117 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 TUBA8Q9NY65 449 aaPredicted RBP16.39■□□□□ 0.21
NPAS3-202ENST00000356141 ENTPD6O75354 484 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 PCMT1P22061 227 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 FAM53BQ14153 422 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 INAVAQ3KP66 663 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 CCDC157Q569K6 752 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 PRPF38BQ5VTL8 546 aaKnown RBP16.39■□□□□ 0.21
NPAS3-202ENST00000356141 ANKRD13BQ86YJ7 626 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 PEX5LQ8IYB4 626 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 RORBQ92753 470 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 GGHQ92820 318 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 EPB41L1Q9H4G0 881 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 RNF167Q9H6Y7 350 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 NECTIN3Q9NQS3 549 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 PRTFDC1Q9NRG1 225 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 ZSCAN32Q9NX65 697 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 PTTG2Q9NZH5 202 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 TPRKBQ9Y3C4 175 aa16.39■□□□□ 0.21
NPAS3-202ENST00000356141 TLX2O43763 284 aaPredicted RBP16.38■□□□□ 0.21
NPAS3-202ENST00000356141 RAB38P57729 211 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 DOC2BQ14184 412 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 SPCS2Q15005 226 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 PDZK1Q5T2W1 519 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 FCRLBQ6BAA4 426 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 SLC30A8Q8IWU4 369 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 NRMQ8IXM6 262 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 B3GNT7Q8NFL0 401 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 EFHD2Q96C19 240 aaPredicted RBP16.38■□□□□ 0.21
NPAS3-202ENST00000356141 PPP1R14BQ96C90 147 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 REV1Q9UBZ9 1251 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 KCND3Q9UK17 655 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 IGKV1D-16P01601 117 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 ANXA11P50995 505 aaKnown RBP16.38■□□□□ 0.21
NPAS3-202ENST00000356141 MGAT2Q10469 447 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 ST3GAL4Q11206 333 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 AQP6Q13520 282 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 CEBPEQ15744 281 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 ACSM5Q6NUN0 579 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 LAPTM4BQ86VI4 370 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 STX19Q8N4C7 294 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 CADM4Q8NFZ8 388 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 TRNT1Q96Q11 434 aaKnown RBP16.38■□□□□ 0.21
NPAS3-202ENST00000356141 LYRM4Q9HD34 91 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 NLGN3Q9NZ94 848 aa16.38■□□□□ 0.21
NPAS3-202ENST00000356141 C19orf53Q9UNZ5 99 aaPredicted RBP16.38■□□□□ 0.21
NPAS3-202ENST00000356141 TMEM265A0A087WTH1 108 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 NOL3O60936 208 aaKnown RBP16.37■□□□□ 0.21
NPAS3-202ENST00000356141 CD1CP29017 333 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 PROX2Q3B8N5 592 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 SMARCD3Q6STE5 483 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 PAQR6Q6TCH4 344 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 GHDCQ8N2G8 530 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 PFN4Q8NHR9 129 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 TCTN2Q96GX1 697 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 OR8D2Q9GZM6 311 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 ATP13A2Q9NQ11 1180 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 PRELID1Q9Y255 219 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 IGHV3-20A0A0C4DH32 117 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 FAM221BA6H8Z2 402 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 AP3D1O14617 1153 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 ADAM11O75078 769 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 RNH1P13489 461 aaKnown RBP16.37■□□□□ 0.21
NPAS3-202ENST00000356141 NCS1P62166 190 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 FLYWCH1Q4VC44 716 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 FHL5Q5TD97 284 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 SLC30A6Q6NXT4 461 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 ZFPM2Q8WW38 1151 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 FTSJ1Q9UET6 329 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 IGHV1OR21-1A0A087WYE8 117 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 ZNF99A8MXY4 864 aaPredicted RBP16.37■□□□□ 0.21
NPAS3-202ENST00000356141 EMDP50402 254 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 CSTF1Q05048 431 aaKnown RBP16.37■□□□□ 0.21
NPAS3-202ENST00000356141 GINS1Q14691 196 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 PRTGQ2VWP7 1150 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 GUSBP11Q6P575 273 aa16.37■□□□□ 0.21
NPAS3-202ENST00000356141 KIF18BQ86Y91 864 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms