RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 P3H2Q8IVL5 708 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 DEPDC4Q8N2C3 294 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 ZNF501Q96CX3 271 aaPredicted RBP23.86■■□□□ 1.41
CLK2-201ENST00000355560 PTCHD1Q96NR3 888 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 SNX5Q9Y5X3 404 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 CYP7B1O75881 506 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 SOX30O94993 753 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 SOX14O95416 240 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 NID1P14543 1247 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 IFNA8P32881 189 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 SLC35A2P78381 396 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 ST3GAL3Q11203 375 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 TMEM236Q5W0B7 351 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 PLEKHM3Q6ZWE6 761 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 LINC00471Q8N535 108 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 SLC38A4Q969I6 547 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 OR1F2PQ96R84 312 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 MCHR1Q99705 422 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 RHNO1Q9BSD3 238 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 CCDC90BQ9GZT6 254 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 IMPAD1Q9NX62 359 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 RSL24D1Q9UHA3 163 aaKnown RBP23.85■■□□□ 1.41
CLK2-201ENST00000355560 CDC14AQ9UNH5 594 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 NTNG1Q9Y2I2 539 aa23.85■■□□□ 1.41
CLK2-201ENST00000355560 ZAR1LA6NP61 321 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 PATE3B3GLJ2 98 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 FAM20BO75063 409 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 MRPL2Q5T653 305 aaKnown RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 MFSD4BQ5TF39 518 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 ZNF574Q6ZN55 896 aaPredicted RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 ZAR1Q86SH2 424 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 ZNF540Q8NDQ6 660 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 OR2I1PQ8NGU4 316 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 CNDP2Q96KP4 475 aaKnown RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 ZNF578Q96N58 590 aaPredicted RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 PELOQ9BRX2 385 aaKnown RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 POLR2J3Q9H1A7 115 aaKnown RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 POLE3Q9NRF9 147 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 TOX3O15405 576 aaPredicted RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 YKT6O15498 198 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 MMP11P24347 488 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 RNF144AP50876 292 aaPredicted RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 FUT7Q11130 342 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 DSG2Q14126 1118 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 TRAM2Q15035 370 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 MINDY4Q4G0A6 757 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 ZER1Q7Z7L7 766 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 CCDC103Q8IW40 242 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 TMEM105Q8N8V8 129 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 OR4N2Q8NGD1 307 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 FKBP10Q96AY3 582 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 ZC3H10Q96K80 434 aaKnown RBP23.84■■□□□ 1.41
CLK2-201ENST00000355560 DUSP21Q9H596 190 aa23.84■■□□□ 1.41
CLK2-201ENST00000355560 TNNI3P19429 210 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 CDC42P60953 191 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 FLYWCH1Q4VC44 716 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 EID2Q8N6I1 236 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 C16orf52Q8NHV5 167 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 RHOXF1Q8NHV9 184 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 OR10A5Q9H207 317 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 MMACHCQ9Y4U1 282 aa23.83■■□□□ 1.41
CLK2-201ENST00000355560 A0A087WUU8 490 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 A0A1W2PQM1 296 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 H3BN98 237 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 M0R129 80 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 RPLP0P05388 317 aaKnown RBP23.83■■□□□ 1.4
CLK2-201ENST00000355560 JUNBP17275 347 aaPredicted RBP23.83■■□□□ 1.4
CLK2-201ENST00000355560 FBLP22087 321 aaKnown RBP23.83■■□□□ 1.4
CLK2-201ENST00000355560 TTKP33981 857 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 ILKQ13418 452 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 CLVS1Q8IUQ0 354 aaPredicted RBP23.83■■□□□ 1.4
CLK2-201ENST00000355560 FAM181AQ8N9Y4 354 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 PMM1Q92871 262 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 TUBA1CQ9BQE3 449 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 ZNF304Q9HCX3 659 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 ZNF226Q9NYT6 803 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 ERVK-18Q9QC07 812 aa23.83■■□□□ 1.4
CLK2-201ENST00000355560 A0A1B0GX78 115 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 CDHR4A6H8M9 788 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 C17orf105B2RV13 164 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 DSCR3O14972 297 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 GALNSP34059 522 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 ZNF136P52737 540 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 BIKQ13323 160 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 NNATQ16517 81 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 C1orf189Q5VU69 101 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 C1orf94Q6P1W5 598 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 NPSR1Q6W5P4 371 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 ANKRD19PQ9H560 264 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 COMMD3-BMI1R4GMX3 469 aa23.82■■□□□ 1.4
CLK2-201ENST00000355560 IGFBP1P08833 259 aaPredicted RBP23.81■■□□□ 1.4
CLK2-201ENST00000355560 GABRB1P18505 474 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 CNR2P34972 360 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 CCL7P80098 99 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 SQSTM1Q13501 440 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 RANBP3LQ86VV4 465 aaPredicted RBP23.81■■□□□ 1.4
CLK2-201ENST00000355560 TSLPQ969D9 159 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 DPYSL5Q9BPU6 564 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 SYNDIG1Q9H7V2 258 aa23.81■■□□□ 1.4
CLK2-201ENST00000355560 Q9N2J8 555 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms