RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 PCDHGA7Q9Y5G6 932 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 A0A1B0GV50 99 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 GJB3O75712 270 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 EPHA4P54764 986 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 STK11Q15831 433 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 NADSYN1Q6IA69 706 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 CPOQ8IVL8 374 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 MCATQ8IVS2 390 aaKnown RBP12.48□□□□□ -0.41
SCN8A-202ENST00000355133 BEST3Q8N1M1 668 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 MARVELD2Q8N4S9 558 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 OR51T1Q8NGJ9 327 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 DTD2Q96FN9 168 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 SGCZQ96LD1 299 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 PCDHA9Q9Y5H5 950 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 GPR39O43194 453 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 TUBB3Q13509 450 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 RNASE10Q5GAN6 216 aaKnown RBP12.48□□□□□ -0.41
SCN8A-202ENST00000355133 HTR3DQ70Z44 454 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 MS4A15Q8N5U1 240 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 SPTSSAQ969W0 71 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 FUNDC2Q9BWH2 189 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 EIF5A2Q9GZV4 153 aaKnown RBP12.48□□□□□ -0.41
SCN8A-202ENST00000355133 DRGXA6NNA5 263 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
SCN8A-202ENST00000355133 AMY2AP04746 511 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 RAC2P15153 192 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 PRDX3P30048 256 aaKnown RBP12.48□□□□□ -0.41
SCN8A-202ENST00000355133 CXCL12P48061 93 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 PRPS1P60891 318 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 HOXC5Q00444 222 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 EXOSC7Q15024 291 aaKnown RBP12.48□□□□□ -0.41
SCN8A-202ENST00000355133 CDKN3Q16667 212 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 OR52R1Q8NGF1 315 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 SH3BGRL2Q9UJC5 107 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 IER3IP1Q9Y5U9 82 aa12.48□□□□□ -0.41
SCN8A-202ENST00000355133 PRSS38A1L453 326 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 SORBS2O94875 1100 aaKnown RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 FUT1P19526 365 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 NCS1P62166 190 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 GALNT1Q10472 559 aaPredicted RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 SQSTM1Q13501 440 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 KIR2DS3Q14952 304 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 FAM43BQ6ZT52 329 aaPredicted RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 MFSD6LQ8IWD5 586 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 KDM1BQ8NB78 822 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 OR5H2Q8NGV7 314 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 OR4K3Q96R72 315 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 CLSTN3Q9BQT9 956 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF160Q9HCG1 818 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 HEBP1Q9NRV9 189 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ADAMTS5Q9UNA0 930 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 CSNK1G3Q9Y6M4 447 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 TRAV18A0A075B6X5 111 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ANKRD28O15084 1053 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 UGDHO60701 494 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 CRTAPO75718 401 aaPredicted RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 EDN1P05305 212 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 PSMB5P28074 263 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 PTH2RP49190 550 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 GABARAPL2P60520 117 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 SELENOWP63302 87 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ARL14Q8N4G2 192 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 SDR9C7Q8NEX9 313 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 LRRTM2O43300 516 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 PRKYO43930 277 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 UBL4AP11441 157 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 APLNRP35414 380 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 PBX2P40425 430 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 STT3AP46977 705 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 OR9K2Q8NGE7 335 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 PREBQ9HCU5 417 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF334Q9HCZ1 680 aaPredicted RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 DNASE1P24855 282 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 FXYD4P59646 89 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 SULT2B1O00204 365 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 DNAJB5O75953 348 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 SDC1P18827 310 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ITGB8P26012 769 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 CSNK2A1P68400 391 aaPredicted RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 DCST2Q5T1A1 773 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 TSPYL5Q86VY4 417 aaPredicted RBP12.47□□□□□ -0.41
SCN8A-202ENST00000355133 DTWD1Q8N5C7 304 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 CSNK2A3Q8NEV1 391 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 PINK1Q9BXM7 581 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 HSPE1-MOB4S4R3N1 261 aa12.47□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF705EA8MWA4 302 aaPredicted RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 RNASET2O00584 256 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ZNF140P52738 457 aaPredicted RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 EEF1A2Q05639 463 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 MRPL43Q8N983 215 aaKnown RBP12.46□□□□□ -0.41
SCN8A-202ENST00000355133 TMIEQ8NEW7 156 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ALG8Q9BVK2 526 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ARL6Q9H0F7 186 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 SLC39A1Q9NY26 324 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 UBQLN2Q9UHD9 624 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 BTNL2Q9UIR0 455 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 C12orf71A8MTZ7 269 aa12.46□□□□□ -0.41
SCN8A-202ENST00000355133 ACTL6BO94805 426 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms