RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 TNFRSF10CO14798 259 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 PRODHO43272 600 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 PRKNO60260 465 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 WBP4O75554 376 aaKnown RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 PLATP00750 562 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 CTBP2P56545 445 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 ARFRP1Q13795 201 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 DGLUCYQ7Z3D6 616 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 SNX29P2Q8IUI4 249 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 TM4SF18Q96CE8 201 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 HS6ST2Q96MM7 605 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 CLEC4MQ9H2X3 399 aaPredicted RBP12.87□□□□□ -0.35
SMC6-201ENST00000351948 PEX16Q9Y5Y5 336 aa12.87□□□□□ -0.35
SMC6-201ENST00000351948 MBTPS2O43462 519 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 UBL4AP11441 157 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 MAGEA12P43365 314 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 FGL2Q14314 439 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 DCAF12Q5T6F0 453 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 PRAMEF8Q5VWM4 474 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 PRAMEF7Q5VXH5 474 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 TMEM92Q6UXU6 159 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ZNF675Q8TD23 568 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ISL2Q96A47 359 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 RLIMQ9NVW2 624 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 COL11A1P12107 1806 aaPredicted RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 APC2O95996 2303 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 SEC16AO15027 2179 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 LOC105369274A0A096LPK9 316 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 LOC102723532A0A0G2JNH3 316 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 CLDN25C9JDP6 229 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 AHCYL1O43865 530 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 CPNE6O95741 557 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 GFERP55789 205 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 GMFBP60983 142 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 VEZF1Q14119 521 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 XKR5Q6UX68 686 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 FUNDC1Q8IVP5 155 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 PHOX2BQ99453 314 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ICKQ9UPZ9 632 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 PCDHA9Q9Y5H5 950 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 GFYI3L273 518 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 J3QRK9 145 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 FARS2O95363 451 aaKnown RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 HLA-DPB1P04440 258 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ZNF791Q3KP31 576 aaPredicted RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 PRSS36Q5K4E3 855 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 TRIM46Q7Z4K8 759 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ARHGAP22Q7Z5H3 698 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 MEIOBQ8N635 442 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 ZNF419Q96HQ0 510 aaPredicted RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 NPLQ9BXD5 320 aaPredicted RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 GLIPR2Q9H4G4 154 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 STOML2Q9UJZ1 356 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 LCMT2O60294 686 aaKnown RBP12.86□□□□□ -0.35
SMC6-201ENST00000351948 CISD3P0C7P0 127 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 RAB38P57729 211 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 TLE3Q04726 772 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 RIN1Q13671 783 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 GPNMBQ14956 572 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
SMC6-201ENST00000351948 SH3D21A4FU49 640 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 GYPBP06028 91 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 NR2C1P13056 603 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 COL9A1P20849 921 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 OGFRL1Q5TC84 451 aaPredicted RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 SLC38A5Q8WUX1 472 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 THAP4Q8WY91 577 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 C12orf43Q96C57 262 aaKnown RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 MRGPRX3Q96LB0 322 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 IFT46Q9NQC8 304 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 ATAD5Q96QE3 1844 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 TRAV27A0A087WT01 109 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 RAD1O60671 282 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 H2BFMP0C1H6 154 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 ZNF28P17035 718 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 SLC5A2P31639 672 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 TRA2BP62995 288 aaKnown RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 MAMDC2Q7Z304 686 aaPredicted RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 ALG14Q96F25 216 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 HOXD1Q9GZZ0 328 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 COMMD9Q9P000 198 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 A0A1B0GVI7 797 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 OTOL1A6NHN0 477 aaPredicted RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 JRKO75564 520 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 FUT1P19526 365 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 DCDP81605 110 aaKnown RBP12.85□□□□□ -0.35
SMC6-201ENST00000351948 APOFQ13790 326 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 MICAQ29983 383 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 RAB43Q86YS6 212 aa12.85□□□□□ -0.35
SMC6-201ENST00000351948 TMEM239Q8WW34 195 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms