RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 ACTR1BP42025 376 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 SLC9A3P48764 834 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 ACTR1AP61163 376 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 RPS25P62851 125 aaKnown RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 DUSP8Q13202 625 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 RUNX2Q13950 521 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 DUSP5Q16690 384 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 PGGHGQ32M88 737 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 DEFB134Q4QY38 66 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 CD200R1LQ6Q8B3 271 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 NCCRP1Q6ZVX7 275 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 ZCCHC10Q8TBK6 192 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 GATAD2BQ8WXI9 593 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 TMEM203Q969S6 136 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 TPK1Q9H3S4 243 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 CACYBPQ9HB71 228 aaKnown RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 PLEKHB1Q9UF11 243 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 ZNF232Q9UNY5 417 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 SLC22A7Q9Y694 548 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 CDH10Q9Y6N8 788 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 H0Y8X5 98 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 APBB3O95704 486 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 CPMP14384 443 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 UGT2B7P16662 529 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 TLX1P31314 330 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 FGF9P31371 208 aaPredicted RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 SLC1A3P43003 542 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 GPR4P46093 362 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 TGM4P49221 684 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 EEF1A1P68104 462 aaKnown RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 TCEA2Q15560 299 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 EIPR1Q53HC9 387 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 EXOSC6Q5RKV6 272 aaKnown RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 TMEM255BQ8WV15 326 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 PILRAQ9UKJ1 303 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 CA5BQ9Y2D0 317 aa20.65■□□□□ 0.9
UPF3A-201ENST00000351487 YARS2Q9Y2Z4 477 aaKnown RBP20.65■□□□□ 0.9
UPF3A-201ENST00000351487 F5P12259 2224 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 KLF8O95600 359 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF136P52737 540 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 SIM1P81133 766 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-201ENST00000351487 MXD1Q05195 221 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 HNRNPA0Q13151 305 aaKnown RBP20.64■□□□□ 0.89
UPF3A-201ENST00000351487 PRRT3Q5FWE3 981 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 FCRL6Q6DN72 434 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 RD3Q7Z3Z2 195 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 OR8H2Q8N162 312 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 IL17RDQ8NFM7 739 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 TSACCQ96A04 125 aaPredicted RBP20.64■□□□□ 0.89
UPF3A-201ENST00000351487 SIPA1Q96FS4 1042 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 RIPOR3Q96MK2 946 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF350Q9GZX5 532 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 NLGN3Q9NZ94 848 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 MUTYHQ9UIF7 546 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 LRP4O75096 1905 aa20.64■□□□□ 0.89
UPF3A-201ENST00000351487 EPOPA6NHQ4 379 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 SSX4O60224 188 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 PIP5K1CO60331 668 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF10P21506 573 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 RPS4Y1P22090 263 aaKnown RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 CASP3P42574 277 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 COL9A2Q14055 689 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 LRIT3Q3SXY7 679 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 ZNF628Q5EBL2 1059 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 FHL5Q5TD97 284 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 HSDL2Q6YN16 418 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 SIMC1Q8NDZ2 872 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 BMFQ96LC9 184 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 SDF2Q99470 211 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 TMEM168Q9H0V1 697 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 PIGUQ9H490 435 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 C19orf53Q9UNZ5 99 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 NCKAP1Q9Y2A7 1128 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 EXOGQ9Y2C4 368 aaKnown RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 PCDHGB2Q9Y5G2 931 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 TNFRSF10CO14798 259 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 IGHA1P01876 353 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 DSG2Q14126 1118 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 GLYR1Q49A26 553 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 ZMAT1Q5H9K5 638 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 NXNL2Q5VZ03 156 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 SHFQ7M4L6 423 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 C11orf74Q86VG3 221 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 CELF2-AS1Q8N7Q2 184 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 CAMKVQ8NCB2 501 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 EFHD2Q96C19 240 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 C1GALT1C1Q96EU7 318 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 JAM3Q9BX67 310 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 MIXL1Q9H2W2 232 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 LYRM4Q9HD34 91 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 KRCC1Q9NPI7 259 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 SLC7A7Q9UM01 511 aa20.63■□□□□ 0.89
UPF3A-201ENST00000351487 ARHGEF17Q96PE2 2063 aaPredicted RBP20.63■□□□□ 0.89
UPF3A-201ENST00000351487 DYRK3O43781 588 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 CLEC2LP0C7M8 214 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 SDC2P34741 201 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 ACSM1Q08AH1 577 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 FIGLAQ6QHK4 219 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 ABHD13Q7L211 337 aa20.62■□□□□ 0.89
UPF3A-201ENST00000351487 OR4N5Q8IXE1 308 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms