RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 NCDNQ9UBB6 729 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SERTAD3Q9UJW9 196 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 LRIT2A6NDA9 550 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 M0QZK8 103 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 GGCTO75223 188 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 ATG12O94817 140 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 HRGP04196 525 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 ZNF865P0CJ78 1059 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 PRKACGP22612 351 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SMAD4Q13485 552 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 COQ5Q5HYK3 327 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC39A5Q6ZMH5 540 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SAMD12Q8N8I0 201 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 TMEM40Q8WWA1 233 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 GEMIN6Q8WXD5 167 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 NSMAFQ92636 917 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 RSC1A1Q92681 617 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 EXTL1Q92935 676 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 HLA-CQ95604 372 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 TSACCQ96A04 125 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 RAB39BQ96DA2 213 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 NSUN5Q96P11 429 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 LOC102723532A0A0G2JNH3 316 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 A6NJ64 397 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 NPIPA5E9PKD4 350 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 M0R143 59 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 NDUFS8O00217 210 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 PEX12O00623 359 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SCAF4O95104 1147 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SCGB1D2O95969 90 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 THBS1P07996 1170 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 JMJD7P0C870 316 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 NME1P15531 152 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 MAP3K8P41279 467 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 GNG10P50151 68 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 PTTG1IPP53801 180 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 OR12D2P58182 307 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 RANP62826 216 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 DECR1Q16698 335 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 ZNF678Q5SXM1 525 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 PDSS1Q5T2R2 415 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 CGB2Q6NT52 195 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 ARHGAP12Q8IWW6 846 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 APCDD1Q8J025 514 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 KIAA1191Q96A73 305 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 IL17FQ96PD4 163 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 PKMYT1Q99640 499 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 MAPKAP1Q9BPZ7 522 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 PTDSS2Q9BVG9 487 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC29A3Q9BZD2 475 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 SLC2A4RGQ9NR83 387 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 MS4A12Q9NXJ0 267 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 ZIM2Q9NZV7 527 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 NPIPA1Q9UND3 350 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 GOLT1BQ9Y3E0 138 aa10.53□□□□□ -0.72
SMARCE1-202ENST00000348513 IGLON5A6NGN9 336 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 CLDN24A6NM45 220 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 ZNF587BE7ETH6 402 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 RNGTTO60942 597 aaKnown RBP10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 GATBO75879 557 aaKnown RBP10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 FHP07954 510 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 MMP12P39900 470 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 ACTBP60709 375 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 ACTG1P63261 375 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 GPLD1P80108 840 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 CLLU1Q5K131 121 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 GALNT10Q86SR1 603 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 AQP11Q8NBQ7 271 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 MR1Q95460 341 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 IL23AQ9NPF7 189 aa10.52□□□□□ -0.72
SMARCE1-202ENST00000348513 IL3P08700 152 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 NNATQ16517 81 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 AFMIDQ63HM1 303 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 GAREM2Q75VX8 874 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 WDTC1Q8N5D0 677 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 DNAJB8Q8NHS0 232 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 THEM6Q8WUY1 208 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 PGAP3Q96FM1 320 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 HSH2DQ96JZ2 352 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 TGM7Q96PF1 710 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 OR2S2Q9NQN1 319 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 OR6C2Q9NZP2 312 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 RIMS3Q9UJD0 308 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 A0A0D9SG52 128 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 FEZF1A0PJY2 475 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SIX6O95475 246 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 IFNA1P01562 189 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 IFNA21P01568 189 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 RAB6AP20340 208 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 NFYAP23511 347 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 OR1E2P47887 323 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 VEGFBP49765 207 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 GSK3BP49841 420 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 RPL23AP62750 156 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 SNTB2Q13425 540 aaKnown RBP10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 GUK1Q16774 197 aa10.52□□□□□ -0.73
SMARCE1-202ENST00000348513 TUSC1Q2TAM9 212 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms