RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 PGDP52209 483 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 SLC35A2P78381 396 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 LSM11P83369 360 aaKnown RBP eCLIP18.57■□□□□ 0.56
RTN1-202ENST00000342503 SERTAD2Q14140 314 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 PEAR1Q5VY43 1037 aaPredicted RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 TMEM71Q6P5X7 295 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 PLEKHM3Q6ZWE6 761 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 TMPRSS9Q7Z410 1059 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 ZER1Q7Z7L7 766 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 ZAR1Q86SH2 424 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 GPR135Q8IZ08 494 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 SLC38A4Q969I6 547 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 ZNF501Q96CX3 271 aaPredicted RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 CNDP2Q96KP4 475 aaKnown RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 VSTM2LQ96N03 204 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 RHNO1Q9BSD3 238 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 NDC1Q9BTX1 674 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 POLR2J3Q9H1A7 115 aaKnown RBP18.57■□□□□ 0.56
RTN1-202ENST00000342503 GAREM1Q9H706 876 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 POLE3Q9NRF9 147 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 SERTAD3Q9UJW9 196 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 GMEB2Q9UKD1 530 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 COMMD3-BMI1R4GMX3 469 aa18.57■□□□□ 0.56
RTN1-202ENST00000342503 PRAMEF2O60811 474 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 SOX30O94993 753 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 SOX14O95416 240 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 GABRB1P18505 474 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 MMP11P24347 488 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 ST3GAL3Q11203 375 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 ILKQ13418 452 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 B3GNT6Q6ZMB0 384 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 ZNF574Q6ZN55 896 aaPredicted RBP18.56■□□□□ 0.56
RTN1-202ENST00000342503 CCDC103Q8IW40 242 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 ZNF540Q8NDQ6 660 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 OR4N2Q8NGD1 307 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 ZNF578Q96N58 590 aaPredicted RBP18.56■□□□□ 0.56
RTN1-202ENST00000342503 PTCHD1Q96NR3 888 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 PELOQ9BRX2 385 aaKnown RBP18.56■□□□□ 0.56
RTN1-202ENST00000342503 OR10A5Q9H207 317 aa18.56■□□□□ 0.56
RTN1-202ENST00000342503 TECTAO75443 2155 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 A0A087WUU8 490 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 M0R129 80 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 MSL3P1P0C860 447 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 NID1P14543 1247 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 TNNI3P19429 210 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 PCMT1P22061 227 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 IFNA8P32881 189 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 TTKP33981 857 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 GALNSP34059 522 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 RFX3P48380 749 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 ZNF136P52737 540 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 FUT7Q11130 342 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 BIKQ13323 160 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 MRPL2Q5T653 305 aaKnown RBP18.55■□□□□ 0.56
RTN1-202ENST00000342503 C1orf94Q6P1W5 598 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 NPSR1Q6W5P4 371 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 P3H2Q8IVL5 708 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 OR13F1Q8NGS4 319 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 PMM1Q92871 262 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 IMPAD1Q9NX62 359 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 SLC6A14Q9UN76 642 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 CDC14AQ9UNH5 594 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 MMACHCQ9Y4U1 282 aa18.55■□□□□ 0.56
RTN1-202ENST00000342503 DSCR3O14972 297 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 OR5F1O95221 314 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 NTN1O95631 604 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 IGKV1D-16P01601 117 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 CLPSP04118 112 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 THY1P04216 161 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 TP53P04637 393 aaPredicted RBP18.54■□□□□ 0.56
RTN1-202ENST00000342503 FBLP22087 321 aaKnown RBP18.54■□□□□ 0.56
RTN1-202ENST00000342503 CNR2P34972 360 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 CDC42P60953 191 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 CSNK2BP67870 215 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 CCL7P80098 99 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 FLYWCH1Q4VC44 716 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 AP1ARQ63HQ0 302 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 CD300LDQ6UXZ3 194 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 MED25Q71SY5 747 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 PRICKLE2Q7Z3G6 844 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 GDF7Q7Z4P5 450 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 FKBP10Q96AY3 582 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 SLC41A3Q96GZ6 507 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 ZC3H10Q96K80 434 aaKnown RBP18.54■□□□□ 0.56
RTN1-202ENST00000342503 OR1F2PQ96R84 312 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 GPA33Q99795 319 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 LHPPQ9H008 270 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 ANKRD19PQ9H560 264 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 ZNF304Q9HCX3 659 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 C11orf16Q9NQ32 467 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 FGF21Q9NSA1 209 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 PATE3B3GLJ2 98 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 H3BN98 237 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 TOX3O15405 576 aaPredicted RBP18.54■□□□□ 0.56
RTN1-202ENST00000342503 SEC14L2O76054 403 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 TEKQ02763 1124 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 SQSTM1Q13501 440 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 DSG2Q14126 1118 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 MFSD4BQ5TF39 518 aa18.54■□□□□ 0.56
RTN1-202ENST00000342503 C1orf189Q5VU69 101 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms