RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 XCR1P46094 333 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 CLDN12P56749 244 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 ILF3Q12906 894 aaKnown RBP eCLIP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 FAHD1Q6P587 224 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 ZNF566Q969W8 418 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 HYLS1Q96M11 299 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 OPALINQ96PE5 141 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 FARSAQ9Y285 508 aaKnown RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 PCDHGB2Q9Y5G2 931 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 MAU2Q9Y6X3 613 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 MEIS3P1A6NDR6 274 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 GFYI3L273 518 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 CD160O95971 181 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 IL1AP01583 271 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SOX18P35713 384 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC6A11P48066 632 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 ILKQ13418 452 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 CDK10Q15131 360 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 BOLLQ8N9W6 283 aaKnown RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 CEP76Q8TAP6 659 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 C1GALT1Q9NS00 363 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 DSCR3O14972 297 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 NARSO43776 548 aaKnown RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 LATS1O95835 1130 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 EPCAMP16422 314 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 HSD17B2P37059 387 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC1A3P43003 542 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SRP9P49458 86 aaKnown RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 WNT3P56703 355 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 ERVK-21P61565 698 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 MRPL58Q14197 206 aaKnown RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 INSL4Q14641 139 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SEC23BQ15437 767 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 CDS1Q92903 461 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 DTD2Q96FN9 168 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC52A3Q9NQ40 469 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 SPATA6Q9NWH7 488 aaPredicted RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 WSB2Q9NYS7 404 aaPredicted RBP11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 HS3ST2Q9Y278 367 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 CDH10Q9Y6N8 788 aa11.69□□□□□ -0.54
SNRNP48-201ENST00000342415 MAS1P04201 325 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 GDI1P31150 447 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ZFP36L2P47974 494 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 DEFB110Q30KQ9 67 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 HSD17B12Q53GQ0 312 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SYT14P1Q58G82 188 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ENTPD8Q5MY95 495 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ZER1Q7Z7L7 766 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 UBQLNLQ8IYU4 475 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC39A11Q8N1S5 342 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SDR9C7Q8NEX9 313 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 KXD1Q9BQD3 176 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 CPEB1Q9BZB8 566 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 MRPS33Q9Y291 106 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 C1orf226A1L170 272 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 POLR1CO15160 346 aaPredicted RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 MAGEB4O15481 346 aaPredicted RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC19A2O60779 497 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PRAMEF4O60810 478 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 RGS9O75916 674 aaPredicted RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SLCO2B1O94956 709 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC2A10O95528 541 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SNRPBP14678 240 aaKnown RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PSPHP78330 225 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 RAB40BQ12829 278 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 FCN2Q15485 313 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PRAMEF9Q5VWM5 478 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 LAIR1Q6GTX8 287 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 TMPRSS12Q86WS5 348 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 LNX2Q8N448 690 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 OR5W2Q8NH69 310 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 C4orf36Q96KX1 117 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ARL6Q9H0F7 186 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 GLIPR2Q9H4G4 154 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SLC28A3Q9HAS3 691 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 CENPMQ9NSP4 180 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ASIC5Q9NY37 505 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 A0A0G2JMP0 313 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 A0A0X1KG70 313 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 C11orf98E9PRG8 122 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SERPINA3P01011 423 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 TFPIP10646 304 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PEPDP12955 493 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PITPNBP48739 271 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 RAB28P51157 221 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 METAP1P53582 386 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 LIM2P55344 173 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 PUM1Q14671 1186 aaKnown RBP eCLIP11.68□□□□□ -0.547e-6■□□□□ 10.1
SNRNP48-201ENST00000342415 P2RY14Q15391 338 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 ACSM3Q53FZ2 586 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 CCDC71Q8IV32 467 aaPredicted RBP11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 OR4M2Q8NGB6 313 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 WFIKKN2Q8TEU8 576 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 APH1BQ8WW43 257 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SNX18Q96RF0 628 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 CDCP1Q9H5V8 836 aa11.68□□□□□ -0.54
SNRNP48-201ENST00000342415 SYNPO2LQ9H987 977 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms