RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 LPCAT3Q6P1A2 487 aa3.36□□□□□ -1.87
SYNE1-201ENST00000341594 NLGN2Q8NFZ4 835 aa3.36□□□□□ -1.87
SYNE1-201ENST00000341594 OR5AK3PQ8NH89 298 aa3.36□□□□□ -1.87
SYNE1-201ENST00000341594 ACE2Q9BYF1 805 aaPredicted RBP3.36□□□□□ -1.87
SYNE1-201ENST00000341594 MYOGP15173 224 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TGFBR3Q03167 851 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 FBXL19Q6PCT2 694 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 PTCHD1Q96NR3 888 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TSSK3Q96PN8 268 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ATG4BQ9Y4P1 393 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 PPIAL4AQ9Y536 164 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 RBM7Q9Y580 266 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 FAM234BA2RU67 622 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ELFN1P0C7U0 828 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 AKT2P31751 481 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 HAAOP46952 286 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 DCAF7P61962 342 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 IL10RBQ08334 325 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SRSF5Q13243 272 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TMEM102Q8N9M5 508 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 BPIFCQ8NFQ6 507 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 RNF170Q96K19 258 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ACBD6Q9BR61 282 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TWSG1Q9GZX9 223 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ARL15Q9NXU5 204 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 WRAP73Q9P2S5 460 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 DDTLA6NHG4 134 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 EIF4EBP3O60516 100 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 VSIG10L2P0DP72 767 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 NKAIN1Q4KMZ8 207 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 GPAT3Q53EU6 434 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 RAB41Q5JT25 222 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CDHR3Q6ZTQ4 885 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 LYSMD3Q7Z3D4 306 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 COMMD2Q86X83 199 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 L3HYPDHQ96EM0 354 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SCGB3A2Q96PL1 93 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 LHPPQ9H008 270 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 NARFQ9UHQ1 456 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CORINQ9Y5Q5 1042 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 A0A0D9SG52 128 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 NR2F6P10588 404 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 JUPP14923 745 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 GBE1Q04446 702 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SYVN1Q86TM6 617 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 GPR63Q9BZJ6 419 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ASAH2Q9NR71 780 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 COL20A1Q9P218 1284 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 EEF1E1O43324 174 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 FRS3O43559 492 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ADAMTS4O75173 837 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 STK16O75716 305 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF705DP0CH99 300 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF705BP0CI00 300 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 AXLP30530 894 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SP140Q13342 867 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 IL18Q14116 193 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 DCAF12L1Q5VU92 463 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 GLB1L2Q8IW92 636 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 RCBTB1Q8NDN9 531 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF419Q96HQ0 510 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TUBA4BQ9H853 241 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 AKTIPQ9H8T0 292 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 PPM1DO15297 605 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 OR2B3O76000 313 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TGFB1P01137 390 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 UGT2B7P16662 529 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CDH17Q12864 832 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF367Q7RTV3 350 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CPEB2Q7Z5Q1 589 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 OR4C5Q8NGB2 326 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CPNE4Q96A23 557 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 FAM120BQ96EK7 910 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 PCDHGC4Q9Y5F7 938 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 DBX1A6NMT0 343 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TRDCB7Z8K6 153 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SFTPBP07988 381 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 PIPP12273 146 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 FABP6P51161 128 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TRA2BP62995 288 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 INSL4Q14641 139 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 NTRK2Q16620 822 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CAPN13Q6MZZ7 669 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SLC36A4Q6YBV0 504 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TKTL2Q9H0I9 626 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SOHLH2Q9NX45 425 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SLC16A8O95907 504 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 BMP5P22003 454 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 UBE2MP61081 183 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 TLE2Q04725 743 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZNF234Q14588 700 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ARL6IP1Q15041 203 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 CCL15Q16663 113 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 PRR22Q8IZ63 422 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 SIDT2Q8NBJ9 832 aaKnown RBP3.35□□□□□ -1.87
SYNE1-201ENST00000341594 OR1M1Q8NGA1 313 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 OR4F6Q8NGB9 312 aa3.35□□□□□ -1.87
SYNE1-201ENST00000341594 ZDHHC1Q8WTX9 485 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms