RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 FANCMQ8IYD8 2048 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 B4DGG1 531 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 GNB5O14775 395 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SSX4O60224 188 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 PRKNO60260 465 aaPredicted RBP9.65□□□□□ -0.86
LIMA1-201ENST00000341247 CDRT1O95170 752 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SEMA4FO95754 770 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SCG5P05408 212 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 TSPAN19P0C672 248 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 CPMP14384 443 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 MYL12AP19105 171 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SOX18P35713 384 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 EIF2B2P49770 351 aaKnown RBP9.65□□□□□ -0.86
LIMA1-201ENST00000341247 TEKQ02763 1124 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 ERV3-1Q14264 604 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SPANXN2Q5MJ10 180 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 PEX5LQ8IYB4 626 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 OR8H2Q8N162 312 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 NANOGP1Q8N7R0 232 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 ANKK1Q8NFD2 765 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SLC37A2Q8TED4 501 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 RSC1A1Q92681 617 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 TBX5Q99593 518 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 ZFYVE21Q9BQ24 234 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 POLDIP3Q9BY77 421 aaKnown RBP9.65□□□□□ -0.86
LIMA1-201ENST00000341247 IL21RQ9HBE5 538 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 CHCHD3Q9NX63 227 aaKnown RBP9.65□□□□□ -0.86
LIMA1-201ENST00000341247 LSM2Q9Y333 95 aaKnown RBP9.65□□□□□ -0.86
LIMA1-201ENST00000341247 KLK4Q9Y5K2 254 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 CDC42EP2O14613 210 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 RDH16O75452 317 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 CT62P0C5K7 136 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 AKT2P31751 481 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 IFNA8P32881 189 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 NCF4Q15080 339 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 TIMM50Q3ZCQ8 353 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 FLYWCH1Q4VC44 716 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SPATC1Q76KD6 591 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 OR4Q3Q8NH05 313 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 GRHL3Q8TE85 626 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 SAMD8Q96LT4 415 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 DPH1Q9BZG8 443 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 MED20Q9H944 212 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
LIMA1-201ENST00000341247 GXYLT2A0PJZ3 443 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 UBXN7O94888 489 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 MED26O95402 600 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 RAB36O95755 333 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 PORP16435 677 aaPredicted RBP9.65□□□□□ -0.87
LIMA1-201ENST00000341247 SLC16A1P53985 500 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 CDK5Q00535 292 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 COX10Q12887 443 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 INSL4Q14641 139 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 KIR2DS3Q14952 304 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 ZNF791Q3KP31 576 aaPredicted RBP9.65□□□□□ -0.87
LIMA1-201ENST00000341247 ZMAT1Q5H9K5 638 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 TMEM184AQ6ZMB5 413 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 PHC2Q8IXK0 858 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 FAM26EQ8N5C1 309 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 COX18Q8N8Q8 333 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 GNPDA2Q8TDQ7 276 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 MOAP1Q96BY2 351 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 SERINC2Q96SA4 455 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 TAPBPLQ9BX59 468 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 GPR174Q9BXC1 333 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 BARHL1Q9BZE3 327 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 FAM60AQ9NP50 221 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 ZNF232Q9UNY5 417 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 LIPT1Q9Y234 373 aa9.65□□□□□ -0.87
LIMA1-201ENST00000341247 LOC110117498-PIK3R3F6TDL0 507 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 PIPP12273 146 aaPredicted RBP9.64□□□□□ -0.87
LIMA1-201ENST00000341247 CTSEP14091 401 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 GABRA3P34903 492 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 OMPP47874 163 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 CDH11P55287 796 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 RPS25P62851 125 aaKnown RBP9.64□□□□□ -0.87
LIMA1-201ENST00000341247 DAB2P98082 770 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 RHAGQ02094 409 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 ZAR1Q86SH2 424 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 CAMKK1Q8N5S9 505 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 CAMKVQ8NCB2 501 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 OR9A4Q8NGU2 314 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 PFN4Q8NHR9 129 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 TM9SF4Q92544 642 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 SDF2Q99470 211 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 ARHGDIGQ99819 225 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 SARGQ9BW04 601 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 TPSD1Q9BZJ3 242 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 MAT2BQ9NZL9 334 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 COL4A2P08572 1712 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 SLC35F4A4IF30 521 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 A6NCN8 305 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 SLITRK5O94991 958 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 APBB3O95704 486 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 CRYBB2P43320 205 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 MTNR1AP48039 350 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 LARS2Q15031 903 aaKnown RBP9.64□□□□□ -0.87
LIMA1-201ENST00000341247 TMEM201Q5SNT2 666 aa9.64□□□□□ -0.87
LIMA1-201ENST00000341247 MRPL2Q5T653 305 aaKnown RBP9.64□□□□□ -0.87
LIMA1-201ENST00000341247 MEDAGQ5VYS4 303 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms