RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
ATXN3-201ENST00000340660 TET2Q6N021 2002 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 URADA6NGE7 173 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 M0R1B8 84 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 PRMT5O14744 637 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 TRIM13O60858 407 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 ANXA9O76027 345 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 AIFM1O95831 613 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 GPANK1O95872 356 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 GOT2P00505 430 aaKnown RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 PRKCAP17252 672 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 LIM2P55344 173 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 RPS13P62277 151 aaKnown RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 HERVK_113P63132 956 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 ERVK-8P63133 956 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 MYBPC1Q00872 1141 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 DBPQ10586 325 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 POU6F1Q14863 301 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 KLHL38Q2WGJ6 581 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 KLF17Q5JT82 389 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 CCDC181Q5TID7 509 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 ERICH6BQ5W0A0 696 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 KRT77Q7Z794 578 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 TOR1AIP2Q8NFQ8 470 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 ABHD11Q8NFV4 315 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 OR5M1Q8NGP8 315 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 NEU4Q8WWR8 484 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 DACT3Q96B18 629 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 DHRS1Q96LJ7 313 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 TBL1YQ9BQ87 522 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 ERVK-6Q9BXR3 956 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 KRTAP4-11Q9BYQ6 195 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 DENND2DQ9H6A0 471 aaPredicted RBP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 TNFRSF12AQ9NP84 129 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.58□□□□□ -0.88
ATXN3-201ENST00000340660 PLEK2Q9NYT0 353 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 TAS2R16Q9NYV7 291 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 KLRF1Q9NZS2 232 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 IP6K2Q9UHH9 426 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 NENFQ9UMX5 172 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 ERVK-19Q9WJR5 959 aa9.58□□□□□ -0.88
ATXN3-201ENST00000340660 IQANK1A0A1B0GTG1 560 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 MROH6A6NGR9 719 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 C3orf70A6NLC5 250 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-201ENST00000340660 C17orf51A8MQB3 221 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 EFCAB8A8MWE9 144 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 ATP6V1G2-DDX39BF2Z307 99 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 H0YL77 283 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 H3BML4 177 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 KLF11O14901 512 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 REM1O75628 298 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 PGM3O95394 542 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 CRYBA1P05813 215 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 GSNP06396 782 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 COX7A2P14406 83 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 SAT1P21673 171 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 CNTFP26441 200 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 ABCD3P28288 659 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 SKIV2L2P42285 1042 aaKnown RBP9.57□□□□□ -0.88
ATXN3-201ENST00000340660 STT3AP46977 705 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 RPS3AP61247 264 aaKnown RBP9.57□□□□□ -0.88
ATXN3-201ENST00000340660 DYNLT1P63172 113 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 SNTA1Q13424 505 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 LAPTM5Q13571 262 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 EFTUD2Q15029 972 aaKnown RBP eCLIP9.57□□□□□ -0.88
ATXN3-201ENST00000340660 PDCD1Q15116 288 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 HSP90AA4PQ58FG1 418 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 ACSBG2Q5FVE4 666 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 OR5M10Q6IEU7 315 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 ACSM5Q6NUN0 579 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 KLHL17Q6TDP4 642 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 FIP1L1Q6UN15 594 aaKnown RBP9.57□□□□□ -0.88
ATXN3-201ENST00000340660 CES3Q6UWW8 571 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 GGNQ86UU5 652 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 TDRPQ86YL5 185 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 OR13J1Q8NGT2 312 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.57□□□□□ -0.88
ATXN3-201ENST00000340660 FAM136AQ96C01 138 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 VAT1Q99536 393 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 TTC1Q99614 292 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 PCBD2Q9H0N5 130 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 ZCCHC4Q9H5U6 513 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 PALMDQ9NP74 551 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 GLRX2Q9NS18 164 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 GPRC5BQ9NZH0 403 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 SLC17A6Q9P2U8 582 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 ANAPC7Q9UJX3 599 aa9.57□□□□□ -0.88
ATXN3-201ENST00000340660 C2orf92A0A1B0GVN3 265 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 OR5H1A6NKK0 313 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 HOXA3O43365 443 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-201ENST00000340660 NHLRC4P0CG21 123 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-201ENST00000340660 IMPDH2P12268 514 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 PECAM1P16284 738 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-201ENST00000340660 AHRP35869 848 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 SERPINF1P36955 418 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 GPR6P46095 362 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-201ENST00000340660 IL1RL1Q01638 556 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 CTSL3PQ5NE16 218 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 RAET1LQ5VY80 246 aa9.56□□□□□ -0.88
ATXN3-201ENST00000340660 SSX8Q7RTT4 187 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms