RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 FZD9O00144 591 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 NUDT1P36639 197 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 FABP6P51161 128 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 FGFBP1Q14512 234 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 LARP4Q71RC2 724 aaKnown RBP eCLIP12.4□□□□□ -0.42
HLCS-201ENST00000336648 KIAA0907Q7Z7F0 614 aaPredicted RBP12.4□□□□□ -0.42
HLCS-201ENST00000336648 SGPP2Q8IWX5 399 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 NPLOC4Q8TAT6 608 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 SLC6A14Q9UN76 642 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 ZNF840PA6NDX5 716 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 LYRM1O43325 122 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 SYT7O43581 403 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 APOA2P02652 100 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 FGF4P08620 206 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 RAB6AP20340 208 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 SPINT3P49223 89 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 GALEQ14376 348 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.4□□□□□ -0.42
HLCS-201ENST00000336648 SSX9Q7RTT3 188 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 GALNT10Q86SR1 603 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.4□□□□□ -0.42
HLCS-201ENST00000336648 ERVK13-1Q9NX77 482 aa12.4□□□□□ -0.42
HLCS-201ENST00000336648 APOBEC3BQ9UH17 382 aaKnown RBP12.4□□□□□ -0.42
HLCS-201ENST00000336648 A6NCN8 305 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 OR2T1O43869 369 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 PCGF2P35227 344 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 CARD17Q5XLA6 110 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 DPY19L4Q7Z388 723 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 OR1J4Q8NGS1 313 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 BORCS6Q96GS4 357 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 TFP02787 698 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 TP53P04637 393 aaPredicted RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 JUNDP17535 347 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 FIGLAQ6QHK4 219 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 KLHDC8AQ8IYD2 350 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 FAM83FQ8NEG4 500 aaPredicted RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 GPR150Q8NGU9 434 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 GPR148Q8TDV2 347 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 MAS1P04201 325 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 ZNF43P17038 809 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 BPIP17213 487 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 ZNF439Q8NDP4 499 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 OR7G1Q8NGA0 311 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 TEPSINQ96N21 525 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 LSM5Q9Y4Y9 91 aaKnown RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 A0A1W2PP55 124 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 BHLHE40O14503 412 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 KIAA0355O15063 1070 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 SNRNP70P08621 437 aaKnown RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 SYN1P17600 705 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 CDKN2DP55273 166 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 CTXN1P60606 82 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 CSNK2A1P68400 391 aaPredicted RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 ACY1Q03154 408 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 SF3A2Q15428 464 aaKnown RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 FAM199XQ6PEV8 388 aaPredicted RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 ABHD12BQ7Z5M8 362 aaPredicted RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 CSNK2A3Q8NEV1 391 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 IGSF8Q969P0 613 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 MSLNLQ96KJ4 702 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 FN3KRPQ9HA64 309 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 KIF25Q9UIL4 384 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 D6RAR5 112 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 RNASET2O00584 256 aaKnown RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 TMEM225BP0DP42 221 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 HOXA9P31269 272 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 GPR4P46093 362 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 SLC6A19Q695T7 634 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 LMO3Q8TAP4 145 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 TRMT10AQ8TBZ6 339 aaKnown RBP12.39□□□□□ -0.43
HLCS-201ENST00000336648 TANKQ92844 425 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 ELMOD3Q96FG2 381 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 DNAJC15Q9Y5T4 150 aa12.39□□□□□ -0.43
HLCS-201ENST00000336648 SNED1Q8TER0 1413 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 OR7A17O14581 309 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 C6P13671 934 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 PBX2P40425 430 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 HSD17B7P56937 341 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 TANGO2Q6ICL3 276 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 PSAPL1Q6NUJ1 521 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 KCTD20Q7Z5Y7 419 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 NOXA1Q86UR1 476 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 ZNF681Q96N22 645 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 PRRT1Q99946 306 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 SAGE1Q9NXZ1 904 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 POU2F3Q9UKI9 436 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 ARPC5O15511 151 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 CYB5BO43169 146 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 STC2O76061 302 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 HTR3AP46098 478 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 PTH2RP49190 550 aa12.38□□□□□ -0.43
HLCS-201ENST00000336648 TRA2BP62995 288 aaKnown RBP12.38□□□□□ -0.43
HLCS-201ENST00000336648 RGNQ15493 299 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms