RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 C7orf57Q8NEG2 295 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 OR4K5Q8NGD3 323 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 FAM81AQ8TBF8 368 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 UBE2FQ969M7 185 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 CNDP2Q96KP4 475 aaKnown RBP13.23□□□□□ -0.29
CHEK2-201ENST00000328354 NDC1Q9BTX1 674 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 POLR2J2Q9GZM3 115 aaKnown RBP13.23□□□□□ -0.29
CHEK2-201ENST00000328354 POLR2J3Q9H1A7 115 aaKnown RBP13.23□□□□□ -0.29
CHEK2-201ENST00000328354 GAREM1Q9H706 876 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 EVA1AQ9H8M9 152 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 VCX3AQ9NNX9 186 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 FSCN3Q9NQT6 498 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 FGF21Q9NSA1 209 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 PLCXD1Q9NUJ7 323 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 SCN3BQ9NY72 215 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 PCDHGB1Q9Y5G3 927 aa13.23□□□□□ -0.29
CHEK2-201ENST00000328354 ZNF318Q5VUA4 2279 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 IGKV3D-11A0A0A0MRZ8 115 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 OR2W5A6NFC9 320 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 A8MU76 341 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 HRKO00198 91 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 AP3D1O14617 1153 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 OR5F1O95221 314 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 CCNYL3P0C7X3 344 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 IFNA8P32881 189 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 CNR2P34972 360 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 TRHRP34981 398 aaPredicted RBP13.22□□□□□ -0.29
CHEK2-201ENST00000328354 KRT20P35900 424 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 ZNF136P52737 540 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 TRAM2Q15035 370 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 PERM1Q5SV97 790 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 FIGNL1Q6PIW4 674 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 TMPRSS9Q7Z410 1059 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 ARHGAP22Q7Z5H3 698 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 ALDH16A1Q8IZ83 802 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 ZNF615Q8N8J6 731 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 CEP76Q8TAP6 659 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 SLC38A4Q969I6 547 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 NODALQ96S42 347 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 FANCEQ9HB96 536 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 CCNB1IP1Q9NPC3 277 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 RASSF1Q9NS23 344 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 SEMA4GQ9NTN9 838 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 ZNF226Q9NYT6 803 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 DHCR7Q9UBM7 475 aaKnown RBP13.22□□□□□ -0.29
CHEK2-201ENST00000328354 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 NDOR1Q9UHB4 597 aa13.22□□□□□ -0.29
CHEK2-201ENST00000328354 A0A087WUU8 490 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 A0A1B0GX78 115 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 CDHR4A6H8M9 788 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 CLDN24A6NM45 220 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 PRR33A8MZF0 331 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 ZNF701M0R085 212 aaPredicted RBP13.21□□□□□ -0.29
CHEK2-201ENST00000328354 PEX12O00623 359 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 CFIP05156 583 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 ALAS2P22557 587 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 MMP11P24347 488 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 GSTT1P30711 240 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 OR1D4P47884 311 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 TARDBPQ13148 414 aaKnown RBP eCLIP13.21□□□□□ -0.29
CHEK2-201ENST00000328354 RAB39AQ14964 217 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 ENTPD8Q5MY95 495 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 ZER1Q7Z7L7 766 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 TMEM105Q8N8V8 129 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 OR7G1Q8NGA0 311 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.21□□□□□ -0.29
CHEK2-201ENST00000328354 IPCEF1Q8WWN9 437 aaPredicted RBP13.21□□□□□ -0.29
CHEK2-201ENST00000328354 NAT6Q93015 286 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 SIGLEC11Q96RL6 698 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 TSC22D3Q99576 134 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 MCHR1Q99705 422 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 ERVK-19Q9WJR5 959 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 COMMD3-BMI1R4GMX3 469 aa13.21□□□□□ -0.29
CHEK2-201ENST00000328354 A0A1W2PQM1 296 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CPED1A4D0V7 1026 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CPSF4LA6NMK7 179 aaKnown RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 PTGES3LE9PB15 166 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 FMO6PO60774 539 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CLPSP04118 112 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 TP53P04637 393 aaPredicted RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 PCMT1P22061 227 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CDC42P60953 191 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 FOXD4Q12950 439 aaPredicted RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 TUBA3CQ13748 450 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 SMN1Q16637 294 aaKnown RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 MRPL2Q5T653 305 aaKnown RBP13.21□□□□□ -0.3
CHEK2-201ENST00000328354 PRAMEF17Q5VTA0 474 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 GTF2IRD2BQ6EKJ0 949 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 ZAR1Q86SH2 424 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 GTF2IRD2Q86UP8 949 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CCDC103Q8IW40 242 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 DTWD2Q8NBA8 298 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 OR13F1Q8NGS4 319 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 C16orf52Q8NHV5 167 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 PTCHD1Q96NR3 888 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.3
CHEK2-201ENST00000328354 CNPPD1Q9BV87 410 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms