RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 HOMEZQ8IX15 550 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 GHDCQ8N2G8 530 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ZSCAN1Q8NBB4 408 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 MORN4Q8NDC4 146 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF540Q8NDQ6 660 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SMAP2Q8WU79 429 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 PTPMT1Q8WUK0 201 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 RPL3LQ92901 407 aaKnown RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 GAL3ST4Q96RP7 486 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 FNDC11Q9BVV2 318 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 OCIAD1Q9NX40 245 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC7A7Q9UM01 511 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 HCN4Q9Y3Q4 1203 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 R4GN57 208 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SH3PXD2BA1X283 911 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 TRIM64A6NGJ6 449 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 C17orf105B2RV13 164 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 RNH1P13489 461 aaKnown RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 RGS8P57771 180 aaPredicted RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 TAS2R41P59536 307 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 INAVAQ3KP66 663 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 KCTD21Q4G0X4 260 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 DCST1Q5T197 706 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 PWWP2BQ6NUJ5 590 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 APOOLQ6UXV4 268 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 KANSL1Q7Z3B3 1105 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 NRMQ8IXM6 262 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 OR5M3Q8NGP4 307 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 MIPOL1Q8TD10 442 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 SFXN5Q8TD22 340 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 C8orf44Q96CB5 159 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 ZDHHC12Q96GR4 267 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 TRNT1Q96Q11 434 aaKnown RBP6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 OR6C1Q96RD1 312 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 FUZQ9BT04 418 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 FOLH1BQ9HBA9 442 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 MUC6Q6W4X9 2439 aa6.49□□□□□ -1.37
LYSMD3-201ENST00000315948 A0A1W2PPW3 197 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZC3H12DA2A288 527 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 C2orf72A6NCS6 295 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 C4orf47A7E2U8 309 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 AP3D1O14617 1153 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF354AO60765 605 aaPredicted RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 IFNA14P01570 189 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 HPCAP84074 193 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ALDH6A1Q02252 535 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZC3H12BQ5HYM0 836 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ATAD3BQ5T9A4 648 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 KRT73Q86Y46 540 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 DPYSL5Q9BPU6 564 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 RNF167Q9H6Y7 350 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 MS4A12Q9NXJ0 267 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 MKL2Q9ULH7 1088 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 PCDHGA10Q9Y5H3 936 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 OTOGLQ3ZCN5 2332 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 RELNP78509 3460 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 AGAP5A6NIR3 686 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 DUX1O43812 170 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 PLOD3O60568 738 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 NSA2O95478 260 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 STSP08842 583 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ITGAMP11215 1152 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF28P17035 718 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF10P21506 573 aaPredicted RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 GPR3P46089 330 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC30A6Q6NXT4 461 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 CBLN3Q6UW01 205 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 DIO2Q92813 273 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 EDAQ92838 391 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 SENP5Q96HI0 755 aaPredicted RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 MPP4Q96JB8 637 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 HRASLS5Q96KN8 279 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 VSTM2LQ96N03 204 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZNF347Q96SE7 839 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 TSC22D3Q99576 134 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 MCHR1Q99705 422 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 BCL2L10Q9HD36 194 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 FTSJ1Q9UET6 329 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ZZEF1O43149 2961 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 A0A087WXM4 84 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 A0A0G2JPF8 293 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 HNRNPCL2B2RXH8 293 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 HNRNPCL3B7ZW38 293 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 IMPA2O14732 288 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 PRKYO43930 277 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 SRPX2O60687 465 aaPredicted RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 FAM20BO75063 409 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 CNOT3O75175 753 aaKnown RBP6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 ALOX12BO75342 701 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 BMP10O95393 424 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 NGFRP08138 427 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 SLC35E2P0CK97 266 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 HNRNPCL4P0DMR1 293 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 CCL4P13236 92 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 PCMT1P22061 227 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 NUDT1P36639 197 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 HMGA2P52926 109 aa6.48□□□□□ -1.37
LYSMD3-201ENST00000315948 EEF1A1P68104 462 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms