RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 RAP2CQ9Y3L5 183 aa14.81□□□□□ -0.04
LSM1-201ENST00000311351 ACTL7BQ9Y614 415 aa14.81□□□□□ -0.04
LSM1-201ENST00000311351 ANKHD1Q8IWZ3 2542 aaKnown RBP14.81□□□□□ -0.04
LSM1-201ENST00000311351 A0A1W2PRB8 838 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 AHRRA9YTQ3 701 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 EMC8O43402 210 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 KCNH1O95259 989 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 UTS2O95399 124 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 EPPINO95925 133 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 ACTL6AO96019 429 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 MYZAPP0CAP1 466 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 DPP4P27487 766 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 GCKP35557 465 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 RPL3P39023 403 aaKnown RBP14.8□□□□□ -0.04
LSM1-201ENST00000311351 SLC1A6P48664 564 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 STARP49675 285 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 GFRA1P56159 465 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 SRYQ05066 204 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 DUSP5Q16690 384 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 GRAMD1BQ3KR37 738 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 PLXDC2Q6UX71 529 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 ZAR1Q86SH2 424 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 MARCH3Q86UD3 253 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 TRIM42Q8IWZ5 723 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 FADS6Q8N9I5 356 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 CDRT4Q8N9R6 151 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 RELL2Q8NC24 303 aaPredicted RBP14.8□□□□□ -0.04
LSM1-201ENST00000311351 SLC16A11Q8NCK7 471 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 OR2M3Q8NG83 312 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 CEP70Q8NHQ1 597 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 JADE3Q92613 823 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 FAM120BQ96EK7 910 aaKnown RBP14.8□□□□□ -0.04
LSM1-201ENST00000311351 SFXN2Q96NB2 322 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 TUBA1CQ9BQE3 449 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 DSN1Q9H410 356 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 C3orf14Q9HBI5 128 aa14.8□□□□□ -0.04
LSM1-201ENST00000311351 ZCCHC3Q9NUD5 404 aaKnown RBP14.8□□□□□ -0.04
LSM1-201ENST00000311351 FAM120CQ9NX05 1096 aaKnown RBP14.8□□□□□ -0.04
LSM1-201ENST00000311351 MRTO4Q9UKD2 239 aaKnown RBP14.8□□□□□ -0.04
LSM1-201ENST00000311351 PDZD2O15018 2839 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 TTC36A6NLP5 189 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 FAM47E-STBD1D6RA91 191 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 H0Y3Z8 333 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 GMFGO60234 142 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 C6orf47O95873 294 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 DDX5P17844 614 aaKnown RBP14.79□□□□□ -0.04
LSM1-201ENST00000311351 CEACAM8P31997 349 aaPredicted RBP14.79□□□□□ -0.04
LSM1-201ENST00000311351 PSMD4P55036 377 aaKnown RBP14.79□□□□□ -0.04
LSM1-201ENST00000311351 BST1Q10588 318 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 MLC1Q15049 377 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 VPS26BQ4G0F5 336 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 CPTPQ5TA50 214 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 NSUN5P2Q63ZY6 315 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 FIGNL1Q6PIW4 674 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 APOOLQ6UXV4 268 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 MED12LQ86YW9 2145 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 RIMKLAQ8IXN7 391 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 MGARPQ8TDB4 240 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 CXorf36Q9H7Y0 433 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 AKTIPQ9H8T0 292 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 MED11Q9P086 117 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 EIF3LQ9Y262 564 aaKnown RBP14.79□□□□□ -0.04
LSM1-201ENST00000311351 SNX8Q9Y5X2 465 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 CSMD2Q7Z408 3487 aa14.79□□□□□ -0.04
LSM1-201ENST00000311351 TMEM120BA0PK00 339 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 CD8B2A6NJW9 211 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 HSPB2A8KAH6 182 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 ZIC3O60481 467 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 HMGN2P05204 90 aaKnown RBP14.78□□□□□ -0.04
LSM1-201ENST00000311351 CPN1P15169 458 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 PRPS1L1P21108 318 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 BMP5P22003 454 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 LHX2P50458 406 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 RPL14P50914 215 aaKnown RBP14.78□□□□□ -0.04
LSM1-201ENST00000311351 ZNF136P52737 540 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 DIO3P55073 304 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 WDR4P57081 412 aaKnown RBP14.78□□□□□ -0.04
LSM1-201ENST00000311351 B3GALT5-AS1P59052 145 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 PRR5P85299 388 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 EMX2Q04743 252 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 MAD2L1Q13257 205 aaPredicted RBP14.78□□□□□ -0.04
LSM1-201ENST00000311351 STX3Q13277 289 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 TP53BP2Q13625 1128 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 LASP1Q14847 261 aaKnown RBP14.78□□□□□ -0.04
LSM1-201ENST00000311351 HSPB2Q16082 182 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 SLC25A35Q3KQZ1 300 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 EXOSC6Q5RKV6 272 aaKnown RBP14.78□□□□□ -0.04
LSM1-201ENST00000311351 CCNJQ5T5M9 372 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 HHATQ5VTY9 493 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 ENPP6Q6UWR7 440 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 COX18Q8N8Q8 333 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 C9orf106Q8NAJ2 232 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 OR5P2Q8WZ92 322 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 COQ8BQ96D53 544 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 G6PC3Q9BUM1 346 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 NUF2Q9BZD4 464 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 TBL1XR1Q9BZK7 514 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 ATAD3AQ9NVI7 634 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 PNPOQ9NVS9 261 aa14.78□□□□□ -0.04
LSM1-201ENST00000311351 FBXO34Q9NWN3 711 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms