RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 DLSTP36957 453 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 OR1E2P47887 323 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 MAPK14Q16539 360 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 DHRS4L2Q6PKH6 230 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 PPP1R32Q7Z5V6 425 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 PEX5LQ8IYB4 626 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 ELP5Q8TE02 316 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 GAL3ST4Q96RP7 486 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 LMF1Q96S06 567 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 NRSN2Q9GZP1 204 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 THSD1Q9NS62 852 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 NDUFAF4Q9P032 175 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 ABCG2Q9UNQ0 655 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 CENPVL1A0A0U1RR11 272 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 TMEM200CA6NKL6 621 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 NPIPB9F8W1W9 429 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 SYT5O00445 386 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 LDLRP01130 860 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 THBS1P07996 1170 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 KCNC4Q03721 635 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 OGFRL1Q5TC84 451 aaPredicted RBP22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 HLA-DQA1Q5Y7H0 255 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 HSPBAP1Q96EW2 488 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 WFDC6Q9BQY6 131 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 AMBRA1Q9C0C7 1298 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 DNAJB9Q9UBS3 223 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 PCDHGA6Q9Y5G7 932 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 PCDHGA10Q9Y5H3 936 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 hCG_2039718K7EN88 272 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 ACOX3O15254 700 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 DEAF1O75398 565 aaPredicted RBP22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 IL33O95760 270 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 CST1P01037 141 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 DBIP07108 87 aaKnown RBP22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 TRIP10Q15642 601 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 DECR1Q16698 335 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 LPCAT4Q643R3 524 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 NDUFAF7Q7L592 441 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 PACS2Q86VP3 889 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 PROX1Q92786 737 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 BDH2Q9BUT1 245 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 ZNF232Q9UNY5 417 aa22.74■■□□□ 1.23
GTF2A1-201ENST00000298173 PEX12O00623 359 aa22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 DPM1O60762 260 aa22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 ATP6V1C1P21283 382 aa22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 NR0B1P51843 470 aaKnown RBP22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 FLYWCH1Q4VC44 716 aa22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 PLAG1Q6DJT9 500 aa22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 OR4D11Q8NGI4 311 aa22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 ZNF443Q9Y2A4 671 aaPredicted RBP22.73■■□□□ 1.23
GTF2A1-201ENST00000298173 NPIPA5A0A0B4J1W7 369 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 DCDC2BA2VCK2 349 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 CDC14CA4D256 554 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 NPIPA7E9PJI5 369 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 NPIPA8P0DM63 369 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 IL7RP16871 459 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 PEX2P28328 305 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 EEF1A1P68104 462 aaKnown RBP22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 PSPHP78330 225 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 RTP5Q14D33 572 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 ZNF141Q15928 474 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 EXT1Q16394 746 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 CLIP4Q8N3C7 705 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 M1APQ8TC57 530 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 TMBIM1Q969X1 311 aa22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 ZNF300Q96RE9 604 aaPredicted RBP22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 TRIM45Q9H8W5 580 aaPredicted RBP22.72■■□□□ 1.23
GTF2A1-201ENST00000298173 TRBV11-1A0A0K0K1C0 115 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 ZFAND5O76080 213 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 SDHBP21912 280 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 RFX3P48380 749 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 ATP12AP54707 1039 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 LARS2Q15031 903 aaKnown RBP22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 OR2T5Q6IEZ7 315 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 CARM1Q86X55 608 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 LACC1Q8IV20 430 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 OR5L2Q8NGL0 311 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 OR2T29Q8NH02 315 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 DIO2Q92813 273 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 MMP25Q9NPA2 562 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 KCND3Q9UK17 655 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 PEX1O43933 1283 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 TSPAN2O60636 221 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 SEMA7AO75326 666 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 DIRAS1O95057 198 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 NID1P14543 1247 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 VHLP40337 213 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 NRF1Q16656 503 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 BTBD16Q32M84 506 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 ZNF836Q6ZNA1 936 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 OR4C3Q8NH37 302 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 EFHD2Q96C19 240 aaPredicted RBP22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 ARHGDIGQ99819 225 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 LIN28AQ9H9Z2 209 aaKnown RBP22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 MRTO4Q9UKD2 239 aaKnown RBP22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 ENPP4Q9Y6X5 453 aa22.71■■□□□ 1.23
GTF2A1-201ENST00000298173 PCSK5Q92824 1860 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 CLDN24A6NM45 220 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 IFNW1P05000 195 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 ITGA2P17301 1181 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms