RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
TTC39B-201ENST00000297615 CCDC86Q9H6F5 360 aaKnown RBP12.66□□□□□ -0.38
TTC39B-201ENST00000297615 NFKBIL1Q9UBC1 381 aaPredicted RBP12.66□□□□□ -0.38
TTC39B-201ENST00000297615 PCDHGA4Q9Y5G9 962 aa12.66□□□□□ -0.38
TTC39B-201ENST00000297615 A0A087WUU8 490 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 C17orf51A8MQB3 221 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 H0YGG7 62 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 PCSK2P16519 638 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 MPIP34949 423 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 AHRP35869 848 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 LIMS1P48059 325 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 SRP54P61011 504 aaKnown RBP12.65□□□□□ -0.38
TTC39B-201ENST00000297615 ARF3P61204 181 aaPredicted RBP12.65□□□□□ -0.38
TTC39B-201ENST00000297615 SYT14P1Q58G82 188 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 DGAT2L6Q6ZPD8 337 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 PLEKHM3Q6ZWE6 761 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 USP53Q70EK8 1073 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 SLC30A8Q8IWU4 369 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 NECTIN4Q96NY8 510 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 QRFPRQ96P65 431 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 EVA1BQ9NVM1 165 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 RPL36Q9Y3U8 105 aaKnown RBP12.65□□□□□ -0.38
TTC39B-201ENST00000297615 A0A1W2PQL4 384 aaPredicted RBP12.65□□□□□ -0.38
TTC39B-201ENST00000297615 GXYLT2A0PJZ3 443 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 TMEM221A6NGB7 291 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 PSMD9O00233 223 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 REM1O75628 298 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 PDE9AO76083 593 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 UGT2B7P16662 529 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 ALAS2P22557 587 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 KCNAB1Q14722 419 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 DUSP5Q16690 384 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 ZNF181Q2M3W8 571 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 AMZ1Q400G9 498 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 CCDC80Q76M96 950 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 OR8J1Q8NGP2 316 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 TEX47Q8TBZ9 253 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 MTERF3Q96E29 417 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 ELP4Q96EB1 424 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 NELL2Q99435 816 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 DPH1Q9BZG8 443 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 MGAT4BQ9UQ53 548 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 LTBP2Q14767 1821 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 A0A1W2PQ09 198 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 HTR3EA5X5Y0 456 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 FAM171A2A8MVW0 826 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 FAAHO00519 579 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 HRO43593 1189 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 NR2F6P10588 404 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 CELP19835 753 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 HCCSP53701 268 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 RPA4Q13156 261 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 ZIC1Q15915 447 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 RNASE12Q5GAN4 147 aaKnown RBP12.65□□□□□ -0.38
TTC39B-201ENST00000297615 IKBIPQ70UQ0 350 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 CADM2Q8N3J6 435 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 WDR34Q96EX3 536 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 PEX11GQ96HA9 241 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 MCHR1Q99705 422 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 TTYH2Q9BSA4 534 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 DDX31Q9H8H2 851 aaKnown RBP12.65□□□□□ -0.38
TTC39B-201ENST00000297615 GIMAP4Q9NUV9 329 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 FKBP14Q9NWM8 211 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 NDOR1Q9UHB4 597 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 COLEC10Q9Y6Z7 277 aa12.65□□□□□ -0.38
TTC39B-201ENST00000297615 PLXNA2O75051 1894 aa12.65□□□□□ -0.39
TTC39B-201ENST00000297615 CDC14CA4D256 554 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 SAGE2PA6NJ88 616 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 FGF17O60258 216 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 SLC35G6P0C7Q6 338 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 GABRA3P34903 492 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 HOXD12P35452 270 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 UGT2B10P36537 528 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 HMGA2P52926 109 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 ZNF45Q02386 682 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 LRIT3Q3SXY7 679 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 FAAH2Q6GMR7 532 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 ASPGQ86U10 573 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 PHC2Q8IXK0 858 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 TBC1D19Q8N5T2 526 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 FBXO15Q8NCQ5 510 aaPredicted RBP12.64□□□□□ -0.39
TTC39B-201ENST00000297615 SLC37A2Q8TED4 501 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 WDR92Q96MX6 357 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 MND1Q9BWT6 205 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 CDCA4Q9BXL8 241 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 SAP130Q9H0E3 1048 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 WASH6PQ9NQA3 447 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 CD8B2A6NJW9 211 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 C2CD4DB7Z1M9 353 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 CASKO14936 926 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 CT62P0C5K7 136 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 CD8BP10966 210 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 PEPDP12955 493 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 RORCP51449 518 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 CCR4P51679 360 aa12.64□□□□□ -0.39
TTC39B-201ENST00000297615 ILF3Q12906 894 aaKnown RBP eCLIP12.64□□□□□ -0.394e-7■■□□□ 13.7
TTC39B-201ENST00000297615 ILKQ13418 452 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms