RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 AQP9O43315 295 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ENTPD3O75355 529 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 NCR1O76036 304 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ARSBP15848 533 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 BDNFP23560 247 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GGT5P36269 586 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 EPHA4P54764 986 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 NDUFA6P56556 154 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SLAMF1Q13291 335 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 OXA1LQ15070 435 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MPEG1Q2M385 716 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CYBRD1Q53TN4 286 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LEG1Q6P5S2 330 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 RFWD3Q6PCD5 774 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LYSMD3Q7Z3D4 306 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PHYKPLQ8IUZ5 450 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ENTHD1Q8IYW4 607 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 OR52H1Q8NGJ2 320 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 HERVK_113Q902F9 699 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35G5Q96KT7 338 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 DISP1Q96F81 1524 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 A6NIZ1 184 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CLDN11O75508 207 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CTDNEP1O95476 244 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MMP3P08254 477 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PRDX5P30044 214 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PTH2RP49190 550 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SELENOVP59797 346 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 RAP1BP61224 184 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ELOA3BQ3SY89 546 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LRRC55Q6ZSA7 311 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 UEVLDQ8IX04 471 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 IL17REQ8NFR9 667 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ELOA3Q8NG57 546 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GNPDA2Q8TDQ7 276 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF226Q9NYT6 803 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CLCA3PQ9Y6N3 262 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM265A0A087WTH1 108 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 NSG1A0A0A6YYJ2 146 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM238LA0A1B0GVL6 79 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 A6NJY4 79 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SPATA31C2B4DYI2 1134 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LRG1P02750 347 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 APEHP13798 732 aaKnown RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PMS2P3Q13401 168 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 FAM74A3Q4VXF1 159 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CPXM2Q8N436 756 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 OR51F2Q8NH61 342 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 FAM46BQ96A09 425 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MUS81Q96NY9 551 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CABLES2Q9BTV7 478 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ADAP2Q9NPF8 381 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 MAN2C1Q9NTJ4 1040 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF891A8MT65 544 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 EEF1E1-BLOC1S5C9J1V9 151 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 H0YGN5 161 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 KCNAB3O43448 404 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PTBP3O95758 552 aaKnown RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ADH5P11766 374 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PTPRAP18433 802 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CDK6Q00534 326 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF763Q0D2J5 394 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM115Q12893 351 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CLLU1Q5K131 121 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 NAA40Q86UY6 237 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LDHDQ86WU2 507 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TMEM139Q8IV31 216 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 STEAP2Q8NFT2 490 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ASB17Q8WXJ9 295 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 C14orf79Q96F83 325 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LRR1Q96L50 414 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SGIP1Q9BQI5 828 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SLC35A5Q9BS91 424 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ALG12Q9BV10 488 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TARS2Q9BW92 718 aaKnown RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 BRF2Q9HAW0 419 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZDHHC18Q9NUE0 388 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF281Q9Y2X9 895 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 NPFFR2Q9Y5X5 522 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 LRRC37A3O60309 1634 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 COL1A2P08123 1366 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 A0A087X0M5 115 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 A0A1B0GX30 115 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ELOA3DA6NLF2 546 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TLX2O43763 284 aaPredicted RBP4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GBAP04062 536 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 UBL4AP11441 157 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 EDNRAP25101 427 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 IVDP26440 423 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 CCR7P32248 378 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 P2RX3P56373 397 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 PHF19Q5T6S3 580 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TMPRSS7Q7RTY8 843 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TRAPPC5Q8IUR0 188 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 TRAM1L1Q8N609 369 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GPR26Q8NDV2 337 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ZNF738Q8NE65 137 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 GPRC5AQ8NFJ5 357 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 SORCS1Q8WY21 1168 aa4.61□□□□□ -1.67
CSMD3-201ENST00000297405 ALG3Q92685 438 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms