RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 SZRD1Q7Z422 152 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SLC22A16Q86VW1 577 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SLC44A2Q8IWA5 706 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 NUDT8Q8WV74 236 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 OMA1Q96E52 524 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 JSRP1Q96MG2 331 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 DEFB127Q9H1M4 99 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 MEAF6Q9HAF1 191 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ACSS1Q9NUB1 689 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ATAD3AQ9NVI7 634 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 TUBA8Q9NY65 449 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 OR10H1Q9Y4A9 318 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 CHCHD2Q9Y6H1 151 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 UBR5O95071 2799 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 A0A1W2PRB8 838 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 FRG2CA6NGY1 282 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 FAM166BA8MTA8 275 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 PDE9AO76083 593 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ABCB1P08183 1280 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 DIO3P55073 304 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 CLDN8P56748 225 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 TXNL4AP83876 142 aaKnown RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SLC25A3Q00325 362 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ZNHIT3Q15649 155 aaPredicted RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 PGS1Q32NB8 556 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 TMEM198Q66K66 360 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SIAH3Q8IW03 269 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SLC34A3Q8N130 599 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 GHDCQ8N2G8 530 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 NATD1Q8N6N6 113 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 TMBIM1Q969X1 311 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 VSTM2LQ96N03 204 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 DOHHQ9BU89 302 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 TTTY12Q9BZ98 90 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 DPY30Q9C005 99 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 C3orf14Q9HBI5 128 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 SH2D2AQ9NP31 389 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 ASIC5Q9NY37 505 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 UBAP1Q9NZ09 502 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 RSL24D1Q9UHA3 163 aaKnown RBP11.1□□□□□ -0.63
HMGB2-201ENST00000296503 MAPRE3Q9UPY8 281 aa11.1□□□□□ -0.63
HMGB2-201ENST00000296503 GOLGA8QA0A0J9YX86 632 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 GOLGA8OA6NCC3 632 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 TRIM64CA6NLI5 447 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 GOLGA8NF8WBI6 632 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 TO15178 435 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 SEMA7AO75326 666 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 PGM3O95394 542 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 HNRNPCP07910 306 aaKnown RBP eCLIP11.09□□□□□ -0.63
HMGB2-201ENST00000296503 CT45A8P0DMV1 189 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 CT45A9P0DMV2 189 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 EPHA3P29320 983 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 FRKP42685 505 aaPredicted RBP11.09□□□□□ -0.63
HMGB2-201ENST00000296503 MYBPC1Q00872 1141 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 SRSF1Q07955 248 aaKnown RBP eCLIP11.09□□□□□ -0.631e-13■■■■■ 36.7
HMGB2-201ENST00000296503 CT45A2Q5DJT8 189 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 PAOXQ6QHF9 649 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 BNC2Q6ZN30 1099 aaPredicted RBP11.09□□□□□ -0.63
HMGB2-201ENST00000296503 LARP4Q71RC2 724 aaKnown RBP eCLIP11.09□□□□□ -0.635e-38■□□□□ 9.5
HMGB2-201ENST00000296503 OR2L13Q8N349 312 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 NUP43Q8NFH3 380 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 OR52N2Q8NGI0 321 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 CEP70Q8NHQ1 597 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 SPPL2AQ8TCT8 520 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 ADAMTS16Q8TE57 1224 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 SECISBP2Q96T21 854 aaKnown RBP11.09□□□□□ -0.63
HMGB2-201ENST00000296503 DUSP26Q9BV47 211 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 WDR55Q9H6Y2 383 aaPredicted RBP11.09□□□□□ -0.63
HMGB2-201ENST00000296503 IL1RL2Q9HB29 575 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 EQTNQ9NQ60 294 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 AP4B1Q9Y6B7 739 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 POLEQ07864 2286 aa11.09□□□□□ -0.63
HMGB2-201ENST00000296503 FLNCQ14315 2725 aa11.08□□□□□ -0.63
HMGB2-201ENST00000296503 TRGV8A0A0C4DH27 118 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 SDHDO14521 159 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 CFLARO15519 480 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 ZNHIT1O43257 154 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 LRRTM2O43300 516 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 EMC8O43402 210 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 ABOP16442 354 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 ZNF12P17014 697 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 IL12BP29460 328 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 HSF1Q00613 529 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 GRAMD1BQ3KR37 738 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 LSM12Q3MHD2 195 aaKnown RBP11.08□□□□□ -0.64
HMGB2-201ENST00000296503 TBCELQ5QJ74 424 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 BICRALQ6AI39 1079 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 DESI1Q6ICB0 168 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 C16orf89Q6UX73 402 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 NPSR1Q6W5P4 371 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 WDR53Q7Z5U6 358 aaPredicted RBP11.08□□□□□ -0.64
HMGB2-201ENST00000296503 RIMKLAQ8IXN7 391 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 OR5P2Q8WZ92 322 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 COQ8BQ96D53 544 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 TMCO6Q96DC7 493 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 COL21A1Q96P44 957 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 ADOQ96SZ5 270 aa11.08□□□□□ -0.64
HMGB2-201ENST00000296503 BHLHE41Q9C0J9 482 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms