RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 H3F3CQ6NXT2 135 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 INO80CQ6PI98 192 aaPredicted RBP13.97□□□□□ -0.17
CCDC140-201ENST00000295226 MICU2Q8IYU8 434 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 TP53INP1Q96A56 240 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 ZG16BQ96DA0 208 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 OMA1Q96E52 524 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 REXO5Q96IC2 774 aaKnown RBP13.97□□□□□ -0.17
CCDC140-201ENST00000295226 RASL10BQ96S79 203 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 ZBTB20Q9HC78 741 aaPredicted RBP13.97□□□□□ -0.17
CCDC140-201ENST00000295226 A4GALTQ9NPC4 353 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 EXD2Q9NVH0 621 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 ANKRD10Q9NXR5 420 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 FLRT3Q9NZU0 649 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 P2RX2Q9UBL9 471 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 MKLN1Q9UL63 735 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 AP4S1Q9Y587 144 aa13.97□□□□□ -0.17
CCDC140-201ENST00000295226 ELOVL7A1L3X0 281 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 CHRNEQ04844 493 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 VMACQ2NL98 169 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 ARHGAP11BQ3KRB8 267 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 ACER2Q5QJU3 275 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 ZNF468Q5VIY5 522 aaPredicted RBP13.96□□□□□ -0.17
CCDC140-201ENST00000295226 LINC00696Q6ZRV3 163 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 SLC5A8Q8N695 610 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 C11orf65Q8NCR3 313 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 CRELD1Q96HD1 420 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 ADOQ96SZ5 270 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 MYCBPQ99417 103 aaPredicted RBP13.96□□□□□ -0.17
CCDC140-201ENST00000295226 QRSL1Q9H0R6 528 aaKnown RBP13.96□□□□□ -0.17
CCDC140-201ENST00000295226 TMEM38AQ9H6F2 299 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 GPR83Q9NYM4 423 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 ACTR3BQ9P1U1 418 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 RAB26Q9ULW5 256 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 AP3M1Q9Y2T2 418 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 PCDHGB3Q9Y5G1 929 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 NPFFR2Q9Y5X5 522 aa13.96□□□□□ -0.17
CCDC140-201ENST00000295226 TPRP12270 2363 aaKnown RBP13.96□□□□□ -0.18
CCDC140-201ENST00000295226 A0A087WV48 116 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 TO15178 435 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 GCM2O75603 506 aaPredicted RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 SMNDC1O75940 238 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 OR6B1O95007 311 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 SOX3P41225 446 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 FBXW4P57775 412 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 PLCXD2Q0VAA5 305 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 GPR68Q15743 365 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 CYP27C1Q4G0S4 372 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 LPCAT4Q643R3 524 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 LCN8Q6JVE9 175 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 LYPD8Q6UX82 237 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 BEST3Q8N1M1 668 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 CHDHQ8NE62 594 aaPredicted RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 C17orf47Q8NEP4 570 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 FDCSPQ8NFU4 85 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 FAM110BQ8TC76 370 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 FIG4Q92562 907 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 HSPBAP1Q96EW2 488 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 SLC38A1Q9H2H9 487 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 ARMC1Q9NVT9 282 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 STMN3Q9NZ72 180 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 DSPP15924 2871 aaKnown RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 CENPVL1A0A0U1RR11 272 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 A6NHS1 94 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 TTC36A6NLP5 189 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 C5orf58C9J3I9 102 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 GSTA4O15217 222 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 ACOX3O15254 700 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 PGM3O95394 542 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 AGR2O95994 175 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 MAGEA8P43361 318 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 NRG3P56975 720 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 CXADRP78310 365 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 DECR1Q16698 335 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 ZNF630Q2M218 657 aaPredicted RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 REEP3Q6NUK4 255 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 JMJD6Q6NYC1 403 aaPredicted RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 IL20RBQ6UXL0 311 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 FRRS1Q6ZNA5 592 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 PTRH1Q86Y79 214 aaKnown RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 TAGAPQ8N103 731 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 SLC34A3Q8N130 599 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 TRNT1Q96Q11 434 aaKnown RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 TREX2Q9BQ50 279 aaPredicted RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 C8orf4Q9NR00 106 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 PLA2G3Q9NZ20 509 aa13.95□□□□□ -0.18
CCDC140-201ENST00000295226 YARS2Q9Y2Z4 477 aaKnown RBP13.95□□□□□ -0.18
CCDC140-201ENST00000295226 DENRO43583 198 aaKnown RBP13.94□□□□□ -0.18
CCDC140-201ENST00000295226 TSPAN2O60636 221 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 UGT2B11O75310 529 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 IL33O95760 270 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 GPIP06744 558 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 UMPSP11172 480 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 HTR1EP28566 365 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 IL12BP29460 328 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 PCGF2P35227 344 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 SSR4P51571 173 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 TMPRSS3P57727 454 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 MEP1AQ16819 746 aa13.94□□□□□ -0.18
CCDC140-201ENST00000295226 TYW3Q6IPR3 259 aaKnown RBP13.94□□□□□ -0.18
CCDC140-201ENST00000295226 TMEM154Q6P9G4 183 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms