RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CLDN4O14493 209 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 MAN1A2O60476 641 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 CTNSO60931 367 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 COQ9O75208 318 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 CYP7B1O75881 506 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 BCL10O95999 233 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 CDK1P06493 297 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ALDH4A1P30038 563 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 MASP1P48740 699 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 NUDT6P53370 316 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ALDH6A1Q02252 535 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 STX4Q12846 297 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SLC13A2Q13183 592 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 DUSP8Q13202 625 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 GRM7Q14831 915 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 DCST2Q5T1A1 773 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SLX4IPQ5VYV7 408 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 C1orf94Q6P1W5 598 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 GPR151Q8TDV0 419 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 TRUB1Q8WWH5 349 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 CCDC74AQ96AQ1 378 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SIGLEC11Q96RL6 698 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 C11orf16Q9NQ32 467 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 CCDC88CQ9P219 2028 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 CPSF4LA6NMK7 179 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 FRS3O43559 492 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ZIC2O95409 532 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 THBS1P07996 1170 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 TNNI3P19429 210 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 MMP11P24347 488 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 BIKQ13323 160 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 GPR68Q15743 365 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 TBCEQ15813 527 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 CLPPQ16740 277 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 PLEKHM3Q6ZWE6 761 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ZER1Q7Z7L7 766 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ZNF619Q8N2I2 560 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 VWA5B2Q8N398 1253 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 MORN4Q8NDC4 146 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 DOK4Q8TEW6 326 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ITFG2Q969R8 447 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 RBM18Q96H35 190 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 AHCYL2Q96HN2 611 aaKnown RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 ZNF350Q9GZX5 532 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 SAP130Q9H0E3 1048 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ARMC7Q9H6L4 198 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 FKBP14Q9NWM8 211 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 GPR55Q9Y2T6 319 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 TMEM184BQ9Y519 407 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 KNL1Q8NG31 2342 aa8.51□□□□□ -1.05
PDPN-201ENST00000294489 ARID1BQ8NFD5 2236 aaPredicted RBP8.51□□□□□ -1.05
PDPN-201ENST00000294489 GON4LQ3T8J9 2241 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 EFCAB10A6NFE3 127 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 AGAP5A6NIR3 686 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 DBIP07108 87 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 RPS4Y1P22090 263 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 CALRP27797 417 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 EXOSC7Q15024 291 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 ZNHIT3Q15649 155 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 CCNJQ5T5M9 372 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 TMEM71Q6P5X7 295 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 ZNF730Q6ZMV8 503 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 P2RY8Q86VZ1 359 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 GALNT12Q8IXK2 581 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 CLIP4Q8N3C7 705 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 TOR1AIP2Q8NFQ8 470 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 DIO2Q92813 273 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 PMM1Q92871 262 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 MCHR1Q99705 422 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 GPR83Q9NYM4 423 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 CNOT2Q9NZN8 540 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 HCN3Q9P1Z3 774 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 NDOR1Q9UHB4 597 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 PI4KAP42356 2102 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 A0A087WUU8 490 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 M0R129 80 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 HYAL3O43820 417 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 ZNF182P17025 639 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 ACVR2AP27037 513 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 C21orf33P30042 268 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 GABRA3P34903 492 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 HSD17B7P56937 341 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 SNRPGP62308 76 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 POU6F2P78424 691 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 ZNF155Q12901 538 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 ENTPD8Q5MY95 495 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 UBE2UQ5VVX9 321 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 ZNF574Q6ZN55 896 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 BMP8AQ7Z5Y6 402 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 RANBP3LQ86VV4 465 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 OR8J1Q8NGP2 316 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 GNPDA2Q8TDQ7 276 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 PIK3R3Q92569 461 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 PEX11GQ96HA9 241 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 ZNF578Q96N58 590 aaPredicted RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 DPYSL5Q9BPU6 564 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 LMF2Q9BU23 707 aaKnown RBP8.5□□□□□ -1.05
PDPN-201ENST00000294489 RBCK1Q9BYM8 510 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 LANCL2Q9NS86 450 aa8.5□□□□□ -1.05
PDPN-201ENST00000294489 CHST2Q9Y4C5 530 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms