RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 PLXNA4Q9HCM2 1894 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 C17orf105B2RV13 164 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 CLDN25C9JDP6 229 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 SCDO00767 359 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 SLC22A1O15245 554 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 SNX4O95219 450 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 ALDH3B2P48448 385 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 BTG2P78543 158 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 EIF2B5Q13144 721 aaKnown RBP8.41□□□□□ -1.06
SEC16A-201ENST00000277537 PRAMEF17Q5VTA0 474 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 POC5Q8NA72 575 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 CYB561A3Q8NBI2 242 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 OR51L1Q8NGJ5 315 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 GOT1L1Q8NHS2 421 aaPredicted RBP8.41□□□□□ -1.06
SEC16A-201ENST00000277537 CAPSLQ8WWF8 208 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 GGHQ92820 318 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 TMEM80Q96HE8 168 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 HRASLS5Q96KN8 279 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 SAMD8Q96LT4 415 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 OR2A5Q96R48 311 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 TUBA1CQ9BQE3 449 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 MKKSQ9NPJ1 570 aaPredicted RBP8.41□□□□□ -1.06
SEC16A-201ENST00000277537 TMEM9Q9P0T7 183 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 CLEC4AQ9UMR7 237 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 PCDHGA6Q9Y5G7 932 aa8.41□□□□□ -1.06
SEC16A-201ENST00000277537 TTC28Q96AY4 2481 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 CHURC1-FNTBB4DL54 471 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 PEX12O00623 359 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 DNAJB6O75190 326 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 CLPXO76031 633 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 OXSR1O95747 527 aaPredicted RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 IFNGP01579 166 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 DBIP07108 87 aaKnown RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 TFPIP10646 304 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 GADD45AP24522 165 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 DEFA1P59665 94 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 DEFA3P59666 94 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 KLHL22Q53GT1 634 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 ALG10BQ5I7T1 473 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 RASGRP3Q8IV61 690 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 LINC00471Q8N535 108 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 OR51Q1Q8NH59 317 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 NDNFQ8TB73 568 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 SFXN5Q8TD22 340 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 KLF15Q9UIH9 416 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 MRTO4Q9UKD2 239 aaKnown RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 LAMTOR5O43504 91 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 HCRTR2O43614 444 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 GIPRP48546 466 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 PUM1Q14671 1186 aaKnown RBP eCLIP8.4□□□□□ -1.066e-6■■□□□ 13.7
SEC16A-201ENST00000277537 ZNF846Q147U1 533 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 INAVAQ3KP66 663 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 PRPF38BQ5VTL8 546 aaKnown RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 CROCCP3Q8IVE0 287 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 PSD4Q8NDX1 1056 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 FANK1Q8TC84 345 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 OSTF1Q92882 214 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 COX4I2Q96KJ9 171 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 CNDP2Q96KP4 475 aaKnown RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 TMED9Q9BVK6 235 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 ACOT13Q9NPJ3 140 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 POLE4Q9NR33 117 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 SIRT3Q9NTG7 399 aaPredicted RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 ZNF443Q9Y2A4 671 aaPredicted RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 CARD8Q9Y2G2 431 aa8.4□□□□□ -1.06
SEC16A-201ENST00000277537 MRPS7Q9Y2R9 242 aaKnown RBP8.4□□□□□ -1.06
SEC16A-201ENST00000277537 DAPL1A0PJW8 107 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 GXYLT2A0PJZ3 443 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 OR2A25A4D2G3 310 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 NPIPB8E9PQR5 432 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 CASC3O15234 703 aaKnown RBP8.4□□□□□ -1.07
SEC16A-201ENST00000277537 SCO2O43819 266 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 HMGN1P05114 100 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 IGHV4-34P06331 123 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 GRK6P43250 576 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 MAGEA2P43356 314 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 CCR5P51681 352 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 PCBP4P57723 403 aaKnown RBP8.4□□□□□ -1.07
SEC16A-201ENST00000277537 DNASE1L3Q13609 305 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 CCINQ13939 588 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 TMEM151BQ8IW70 566 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 SIMC1Q8NDZ2 872 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 OR2T33Q8NG76 320 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 GATAD2BQ8WXI9 593 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 RNFT2Q96EX2 444 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 FCRL1Q96LA6 429 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 TRNT1Q96Q11 434 aaKnown RBP8.4□□□□□ -1.07
SEC16A-201ENST00000277537 SPRTNQ9H040 489 aaPredicted RBP8.4□□□□□ -1.07
SEC16A-201ENST00000277537 THSD1Q9NS62 852 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 TNFRSF10DQ9UBN6 386 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 PCDHGA10Q9Y5H3 936 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 HEATR5BQ9P2D3 2071 aa8.4□□□□□ -1.07
SEC16A-201ENST00000277537 H3BSH0 61 aa8.39□□□□□ -1.07
SEC16A-201ENST00000277537 TBX1O43435 398 aa8.39□□□□□ -1.07
SEC16A-201ENST00000277537 HCN1O60741 890 aa8.39□□□□□ -1.07
SEC16A-201ENST00000277537 CELP19835 753 aa8.39□□□□□ -1.07
SEC16A-201ENST00000277537 FBLP22087 321 aaKnown RBP8.39□□□□□ -1.07
SEC16A-201ENST00000277537 MMP11P24347 488 aa8.39□□□□□ -1.07
SEC16A-201ENST00000277537 SOX3P41225 446 aa8.39□□□□□ -1.07
SEC16A-201ENST00000277537 AFF3P51826 1226 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms