RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 SNRPNP63162 240 aaKnown RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 PRR5P85299 388 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 HOXC5Q00444 222 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TGM3Q08188 693 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TMEM44Q2T9K0 475 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TBRG1Q3YBR2 411 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 METAP1DQ6UB28 335 aaPredicted RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 ZNF620Q6ZNG0 422 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TRILQ7L0X0 811 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 GET4Q7L5D6 327 aaPredicted RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 OR9A2Q8NGT5 310 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 OR52N1Q8NH53 320 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 PIGXQ8TBF5 258 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 AP3S1Q92572 193 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 SMARCD2Q92925 531 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 DEPDC7Q96QD5 511 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TIMP4Q99727 224 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TWSG1Q9GZX9 223 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 MARCH7Q9H992 704 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 ASB6Q9NWX5 421 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 CALML5Q9NZT1 146 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 CBLCQ9ULV8 474 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 NDRG2Q9UN36 371 aaKnown RBP11.63□□□□□ -0.55
BEST3-201ENST00000266661 KCNK6Q9Y257 313 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
BEST3-201ENST00000266661 TBC1D3BA6NDS4 549 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 SCO2O43819 266 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 HCN1O60741 890 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 TMCC2O75069 709 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 GALP22466 123 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 APEX1P27695 318 aaKnown RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 HLA-DMAP28067 261 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 HTR1FP30939 366 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 MPIP34949 423 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 EVX1P49640 407 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 PDX1P52945 283 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 CDH11P55287 796 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 CDK10Q15131 360 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 CST6Q15828 149 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 PGGHGQ32M88 737 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 EXOSC6Q5RKV6 272 aaKnown RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 C1QTNF12Q5T7M4 302 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 FRRS1Q6ZNA5 592 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 TMEM91Q6ZNR0 172 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 MBOAT2Q6ZWT7 520 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 GDF7Q7Z4P5 450 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 LHFPL3Q86UP9 236 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 GATAD2AQ86YP4 633 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 ZFP41Q8N8Y5 198 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 DUSP18Q8NEJ0 188 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 OR4F15Q8NGB8 312 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 DNAJA4Q8WW22 397 aaPredicted RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 OSTF1Q92882 214 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 NECAB3Q96P71 396 aaPredicted RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 C1QTNF2Q9BXJ5 285 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 ACTRT3Q9BYD9 372 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 RNF32Q9H0A6 362 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 C6orf106Q9H6K1 298 aaPredicted RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 SYNDIG1Q9H7V2 258 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 RNF121Q9H920 327 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 TRPV4Q9HBA0 871 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 GIMAP4Q9NUV9 329 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 IMP3Q9NV31 184 aaKnown RBP11.62□□□□□ -0.55
BEST3-201ENST00000266661 ENTPD4Q9Y227 616 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 GSTK1Q9Y2Q3 226 aa11.62□□□□□ -0.55
BEST3-201ENST00000266661 OR52A4PA6NMU1 304 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 KCNJ13O60928 360 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 PCDH8O95206 1070 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 OR5F1O95221 314 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 LYPD3O95274 346 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 ZNF136P52737 540 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 DSG2Q14126 1118 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 PDGFRLQ15198 375 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 LTB4RQ15722 352 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 ZFP69Q49AA0 526 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 SLC30A6Q6NXT4 461 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 VN1R4Q7Z5H5 301 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 LIX1LQ8IVB5 337 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 SRFBP1Q8NEF9 429 aaKnown RBP11.61□□□□□ -0.55
BEST3-201ENST00000266661 BBS1Q8NFJ9 593 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 TOR1AIP2Q8NFQ8 470 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 RFKQ969G6 155 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 SCARF2Q96GP6 870 aaPredicted RBP11.61□□□□□ -0.55
BEST3-201ENST00000266661 KCNJ15Q99712 375 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 RMI1Q9H9A7 625 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 TOR4AQ9NXH8 423 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 OBP2AQ9NY56 170 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 DPP7Q9UHL4 492 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 POLHQ9Y253 713 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 PCDHGB7Q9Y5F8 929 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 LINC00854A0A1B0GVQ3 168 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 SMIM30A4D0T7 59 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 CENPXA8MT69 81 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 A8MV72 311 aaPredicted RBP11.61□□□□□ -0.55
BEST3-201ENST00000266661 GABRPO00591 440 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 CDC42EP2O14613 210 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 PIP5K1CO60331 668 aa11.61□□□□□ -0.55
BEST3-201ENST00000266661 SLC2A10O95528 541 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms