RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TP53I11O14683 189 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 HNRNPCL1O60812 293 aaKnown RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 DNAJA2O60884 412 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 STX11O75558 287 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 REM1O75628 298 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 CYP4B1P13584 511 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ADH7P40394 386 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 CASRP41180 1078 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 CRATP43155 626 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 NUDT2P50583 147 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 GAS1P54826 345 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 PCBP3P57721 371 aaKnown RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 EEFSECP57772 596 aaKnown RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 MTPNP58546 118 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 PSME3P61289 254 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 VEZF1Q14119 521 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 GNA13Q14344 377 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 OR1C1Q15619 314 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ZNF141Q15928 474 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 NNATQ16517 81 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ZNF630Q2M218 657 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 KLHL26Q53HC5 615 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 TBCELQ5QJ74 424 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 SLC22A10Q63ZE4 541 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 IL20RBQ6UXL0 311 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 MDGA2Q7Z553 956 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ZAR1Q86SH2 424 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 CYP4Z2PQ8N1L4 340 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ARHGAP24Q8N264 748 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 FBXW8Q8N3Y1 598 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 OR10G3Q8NGC4 313 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 PNPT1Q8TCS8 783 aaKnown RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 JADE3Q92613 823 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 SLC7A6OSQ96CW6 309 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 RMND5BQ96G75 393 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 SIGLEC12Q96PQ1 595 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ADOQ96SZ5 270 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 THUMPD3Q9BV44 507 aaKnown RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ANGPTL4Q9BY76 406 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 SLC25A18Q9H1K4 315 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 MTHFD2LQ9H903 347 aaPredicted RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 UBQLN4Q9NRR5 601 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 CALML5Q9NZT1 146 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 P2RX2Q9UBL9 471 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 SUCOQ9UBS9 1254 aaKnown RBP13.1□□□□□ -0.31
SSBP1-201ENST00000265304 CD300AQ9UGN4 299 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 PRDM4Q9UKN5 801 aa13.1□□□□□ -0.31
SSBP1-201ENST00000265304 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 B2RBV5 119 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 ALG1L2C9J202 215 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 NME4O00746 187 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 KIAA0513O60268 411 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 NME2P1O60361 137 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 FCMRO60667 390 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 ATP5HO75947 161 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 SP1P08047 785 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 NUDT7P0C024 238 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 ETS2P15036 469 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 RPS4Y1P22090 263 aaKnown RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 NME2P22392 152 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 PTGDSP41222 190 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 CASP3P42574 277 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 ATP12AP54707 1039 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 FBXW4P57775 412 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 RPP38P78345 283 aaKnown RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 HYAL4Q2M3T9 481 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 SPINK14Q6IE38 97 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 TYW3Q6IPR3 259 aaKnown RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 FRRS1Q6ZNA5 592 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 CCDC80Q76M96 950 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 SLC30A8Q8IWU4 369 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 PRR22Q8IZ63 422 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 ANKFN1Q8N957 763 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 RBM15BQ8NDT2 890 aaKnown RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 PSD4Q8NDX1 1056 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 OR4C3Q8NH37 302 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 FBXO30Q8TB52 745 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 TMCO6Q96DC7 493 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 REXO5Q96IC2 774 aaKnown RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 TREX2Q9BQ50 279 aaPredicted RBP13.09□□□□□ -0.31
SSBP1-201ENST00000265304 ARHGAP9Q9BRR9 750 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 RUBCNLQ9H714 662 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 HHATLQ9HCP6 504 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 SPAG4Q9NPE6 437 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 TIMMDC1Q9NPL8 285 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 KCNE5Q9UJ90 142 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 NCKAP5O14513 1909 aa13.09□□□□□ -0.31
SSBP1-201ENST00000265304 SHANK1Q9Y566 2161 aa13.08□□□□□ -0.31
SSBP1-201ENST00000265304 IGLV3-32A0A0A0MS00 114 aa13.08□□□□□ -0.32
SSBP1-201ENST00000265304 ATXN7O15265 892 aaPredicted RBP13.08□□□□□ -0.32
SSBP1-201ENST00000265304 TRIM3O75382 744 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms