RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 EMDP50402 254 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 RPS15P62841 145 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 RHAGQ02094 409 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 KCNC4Q03721 635 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF155Q12901 538 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 DNASE1L3Q13609 305 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 GK3PQ14409 553 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF267Q14586 743 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 PDK3Q15120 406 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 VWA2Q5GFL6 755 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF605Q86T29 641 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 CHDHQ8NE62 594 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 CT55Q8WUE5 264 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 TFAP2CQ92754 450 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 PROX1Q92786 737 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF347Q96SE7 839 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 PELOQ9BRX2 385 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 REEP1Q9H902 201 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 FOLH1BQ9HBA9 442 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 IL17BQ9UHF5 180 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 TESMINQ9Y4I5 508 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 PCDHGB5Q9Y5G0 923 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 NKX2-2O95096 273 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 SNAP29O95721 258 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 CLPSP04118 112 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 IFNW1P05000 195 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 ITGA2P17301 1181 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 WT1P19544 449 aaPredicted RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 RORAP35398 523 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 FUT7Q11130 342 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 MINDY4Q4G0A6 757 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 DCST2Q5T1A1 773 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 CCNJQ5T5M9 372 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 TYW3Q6IPR3 259 aaKnown RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 CARM1Q86X55 608 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 LACC1Q8IV20 430 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 OR4C15Q8NGM1 316 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 PIK3R3Q92569 461 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 ZG16BQ96DA0 208 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 CNBD2Q96M20 576 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 SDF2Q99470 211 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 EPYCQ99645 322 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 LMF2Q9BU23 707 aaKnown RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 ADI1Q9BV57 179 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 CNPPD1Q9BV87 410 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 SPATA5L1Q9BVQ7 753 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 GPR87Q9BY21 358 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 AKIRIN1Q9H9L7 192 aaPredicted RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 MKKSQ9NPJ1 570 aaPredicted RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 UBAP1Q9NZ09 502 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 IFT80Q9P2H3 777 aaPredicted RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 CTSFQ9UBX1 484 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 ERVK-19Q9WJR5 959 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 DTX4Q9Y2E6 619 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 HEMK1Q9Y5R4 338 aaPredicted RBP16.18■□□□□ 0.18
SRSF1-201ENST00000258962 LYVE1Q9Y5Y7 322 aa16.18■□□□□ 0.18
SRSF1-201ENST00000258962 GXYLT2A0PJZ3 443 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 C9J4A7 227 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 SEMA7AO75326 666 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 IFNA16P05015 189 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 ALPPP05187 535 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 PABPC4LP0CB38 370 aaKnown RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 FUT4P22083 530 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 ARHGDIAP52565 204 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 HPCAP84074 193 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 MERTKQ12866 999 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 EPS8Q12929 822 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 BIKQ13323 160 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 VRK2Q86Y07 508 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 RBM45Q8IUH3 476 aaKnown RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 COX18Q8N8Q8 333 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 VANGL1Q8TAA9 524 aaPredicted RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 PTPMT1Q8WUK0 201 aaPredicted RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 NRBF2Q96F24 287 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 VSTM2LQ96N03 204 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 PIP5K1AQ99755 562 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 RBM4BQ9BQ04 359 aaKnown RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 RBM4Q9BWF3 364 aaKnown RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 PINK1Q9BXM7 581 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 FAM117AQ9C073 453 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF350Q9GZX5 532 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 FBXO34Q9NWN3 711 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 TMEFF2Q9UIK5 374 aaPredicted RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 MKLN1Q9UL63 735 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 FARSAQ9Y285 508 aaKnown RBP16.17■□□□□ 0.18
SRSF1-201ENST00000258962 CHST2Q9Y4C5 530 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 PCDHGB3Q9Y5G1 929 aa16.17■□□□□ 0.18
SRSF1-201ENST00000258962 TCRBV16S1A1N1A0A5B0 115 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 FFAR1O14842 300 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 ADAMDEC1O15204 470 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 PRAMEF2O60811 474 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 LYNP07948 512 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 UBTFL6P0CB48 400 aaPredicted RBP16.16■□□□□ 0.18
SRSF1-201ENST00000258962 THRBP10828 461 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 F8A1P23610 371 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 GABRA3P34903 492 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 PGDP52209 483 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 CHN2P52757 468 aa16.16■□□□□ 0.18
SRSF1-201ENST00000258962 DCDP81605 110 aaKnown RBP16.16■□□□□ 0.18
SRSF1-201ENST00000258962 PSG6Q00889 435 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms