RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ADAM30Q9UKF2 790 aa17.74■□□□□ 0.43
SNX4-201ENST00000251775 A0A1W2PRQ8 180 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 IRGMA1A4Y4 181 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 C7orf66A4D0T2 115 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 PRR23AA6NEV1 266 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 ANHXE9PGG2 379 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 TBX19O60806 448 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 CLCNKAP51800 687 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 POU4F3Q15319 338 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 MINDY4Q4G0A6 757 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 TJAP1Q5JTD0 557 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 TMEM65Q6PI78 240 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 B3GLCTQ6Y288 498 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 SLC36A4Q6YBV0 504 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 ASB18Q6ZVZ8 466 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 C6orf120Q7Z4R8 191 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 UBE3DQ7Z6J8 389 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 IQCHQ86VS3 1027 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 ZNF655Q8N720 491 aaPredicted RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 LINC01555Q8NAE3 123 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 SMPDL3AQ92484 453 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 EXOSC8Q96B26 276 aaKnown RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 GHITMQ9H3K2 345 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 EMC7Q9NPA0 242 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 MBNL1Q9NR56 388 aaKnown RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 TEX10Q9NXF1 929 aaPredicted RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 M0R3H8 397 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 LCMT2O60294 686 aaKnown RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 SLC19A2O60779 497 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 CFL1P23528 166 aaKnown RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 BTCP35070 178 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 SLC1A3P43003 542 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 SMSP52788 366 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 ZNF155Q12901 538 aaPredicted RBP17.73■□□□□ 0.43
SNX4-201ENST00000251775 NDUFA9Q16795 377 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 OTULINQ96BN8 352 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 SCMH1Q96GD3 660 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 SORCS2Q96PQ0 1159 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 MAN2C1Q9NTJ4 1040 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 ZNF222Q9UK12 451 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 RWDD3Q9Y3V2 267 aa17.73■□□□□ 0.43
SNX4-201ENST00000251775 A0A0G2JN53 185 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 RPS10-NUDT3A0A1W2PQS6 291 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 CD8B2A6NJW9 211 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 PPM1DO15297 605 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 OR1F1O43749 312 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 HLA-DPB1P04440 258 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 RPN2P04844 631 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 CD8BP10966 210 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 CELP19835 753 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 PTGS2P35354 604 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 FRKP42685 505 aaPredicted RBP17.72■□□□□ 0.43
SNX4-201ENST00000251775 WASP42768 502 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 SOX9P48436 509 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 MEX3DQ86XN8 651 aaKnown RBP17.72■□□□□ 0.43
SNX4-201ENST00000251775 UBL7Q96S82 380 aaPredicted RBP17.72■□□□□ 0.43
SNX4-201ENST00000251775 EGLN3Q9H6Z9 239 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 THAP10Q9P2Z0 257 aaPredicted RBP17.72■□□□□ 0.43
SNX4-201ENST00000251775 SEC14L3Q9UDX4 400 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 DPP7Q9UHL4 492 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 OR1A2Q9Y585 309 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 RFXAPO00287 272 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 DVL2O14641 736 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 NDUFS4O43181 175 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 PCDH8O95206 1070 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 STOMP27105 288 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 HSD17B2P37059 387 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 VASNQ6EMK4 673 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 C1orf94Q6P1W5 598 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 TMEM91Q6ZNR0 172 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 MORN4Q8NDC4 146 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 NACC2Q96BF6 587 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 ARMC5Q96C12 935 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 CHFRQ96EP1 664 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 ABCG5Q9H222 651 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 SERHL2Q9H4I8 314 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 POLHQ9Y253 713 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 GOLGA4Q13439 2230 aaKnown RBP17.72■□□□□ 0.43
SNX4-201ENST00000251775 CKAP5Q14008 2032 aa17.72■□□□□ 0.43
SNX4-201ENST00000251775 TRAV6A0A075B6T7 132 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 TRIM77I1YAP6 450 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 CACNB4O00305 520 aaPredicted RBP17.71■□□□□ 0.43
SNX4-201ENST00000251775 HMGN4O00479 90 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 MID1O15344 667 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 SLC35G4P0C7Q5 338 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 NAGAP17050 411 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 SPDYE7PQ495Y7 208 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 ENTPD8Q5MY95 495 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 GPR139Q6DWJ6 353 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 COMMD7Q86VX2 200 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 NR2C2APQ86WQ0 139 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 NUDT13Q86X67 352 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 BMPERQ8N8U9 685 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 MSANTD3Q96H12 275 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 THAP7Q9BT49 309 aaPredicted RBP17.71■□□□□ 0.43
SNX4-201ENST00000251775 CTRB1P17538 263 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 CXCL3P19876 107 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 CSNK1G2P78368 415 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 COL28A1Q2UY09 1125 aa17.71■□□□□ 0.43
SNX4-201ENST00000251775 AGBL4Q5VU57 503 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms