RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 V9GYH0 126 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 LRP4O75096 1905 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 TMEM129A0AVI4 362 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR6C74A6NCV1 312 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 B3GALT2O43825 422 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 SSX4O60224 188 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 APBB3O95704 486 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 MSL3P1P0C860 447 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 LIMS3P0CW19 117 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 LIMS4P0CW20 117 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 IFNA8P32881 189 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 FLCNQ8NFG4 579 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 PATE1Q8WXA2 126 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 SIAEQ9HAT2 523 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 IL20Q9NYY1 176 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 ACTR10Q9NZ32 417 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 SF3B6Q9Y3B4 125 aaKnown RBP18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC22A7Q9Y694 548 aa18.23■□□□□ 0.51
CDC42EP1-201ENST00000249014 SURF4O15260 269 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 TSPAN19P0C672 248 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 CLEC2LP0C7M8 214 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 CPMP14384 443 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 RPS25P62851 125 aaKnown RBP18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 ALG11Q2TAA5 492 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZMAT1Q5H9K5 638 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 KIAA1324Q6UXG2 1013 aaKnown RBP18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 CCBE1Q6UXH8 406 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 MBOAT2Q6ZWT7 520 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 USP53Q70EK8 1073 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 LAPTM4BQ86VI4 370 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC25A46Q96AG3 418 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 SDF2Q99470 211 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 CCDC32Q9BV29 185 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 SLC7A7Q9UM01 511 aa18.22■□□□□ 0.51
CDC42EP1-201ENST00000249014 MN1Q10571 1320 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 SNTNA6NMZ2 147 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 CDC42EP2O14613 210 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 OR5F1O95221 314 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 PVRP15151 417 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 HNRNPA2B1P22626 353 aaKnown RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF136P52737 540 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 SRP54P61011 504 aaKnown RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 PSPHP78330 225 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 SELENBP1Q13228 472 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 LARS2Q15031 903 aaKnown RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 GPR68Q15743 365 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 MAPK14Q16539 360 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF628Q5EBL2 1059 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 PEX5LQ8IYB4 626 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 TRIM45Q9H8W5 580 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 EVA1BQ9NVM1 165 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 MUTYHQ9UIF7 546 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 TRAPPC4Q9Y296 219 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 H3BQ06 376 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 STK25O00506 426 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 LDB3O75112 727 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 AGR2O95994 175 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 STAT5AP42229 794 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 LSSP48449 732 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 CDH11P55287 796 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 TPTEP56180 551 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 EEF1A1P68104 462 aaKnown RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF79Q15937 498 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 PLK5Q496M5 336 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 FHL5Q5TD97 284 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 AADACL4Q5VUY2 407 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF620Q6ZNG0 422 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 LHFPL3Q86UP9 236 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 SFTPA2Q8IWL1 248 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 GALNT12Q8IXK2 581 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 SAMD14Q8IZD0 417 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 ZNF485Q8NCK3 441 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 TMEM52Q8NDY8 209 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 OSTF1Q92882 214 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 TM9SF2Q99805 663 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 PTGFRNQ9P2B2 879 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 TBC1D24Q9ULP9 559 aa18.21■□□□□ 0.51
CDC42EP1-201ENST00000249014 IQCMA0A1B0GVH7 501 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 IRGMA1A4Y4 181 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 SNPHO15079 494 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 SLC2A10O95528 541 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 IL1AP01583 271 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 EIF2S1P05198 315 aaKnown RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 PRG2P13727 222 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 NDUFV2P19404 249 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 TLX1P31314 330 aaPredicted RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 TPBGQ13641 420 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 TMEM92Q6UXU6 159 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 SPATC1Q76KD6 591 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZFP41Q8N8Y5 198 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 BBS1Q8NFJ9 593 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 OR4F15Q8NGB8 312 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 FAM3CQ92520 227 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 TXNDC15Q96J42 360 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 ARHGAP9Q9BRR9 750 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 ADAP2Q9NPF8 381 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 FBXO34Q9NWN3 711 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 TOR4AQ9NXH8 423 aa18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 PAIP2BQ9ULR5 123 aaKnown RBP18.2■□□□□ 0.5
CDC42EP1-201ENST00000249014 ZNF232Q9UNY5 417 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms